RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 RNF14Q9UBS8 474 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 PCSK1NQ9UHG2 260 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 STAP1Q9ULZ2 295 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 PCDHB12Q9Y5F1 795 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 PCDHA3Q9Y5H8 950 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 HELZP42694 1942 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 DENND4CQ5VZ89 1909 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 ANAPC1Q9H1A4 1944 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 MTCL1Q9Y4B5 1905 aaKnown RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 WDR27A2RRH5 827 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 CCDC85CA6NKD9 419 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 YJEFN3A6XGL0 299 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 E7ENQ6 273 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 KRIT1O00522 736 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 CTIFO43310 598 aaKnown RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 PRPSAP2O60256 369 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 FGF18O76093 207 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 EFEMP2O95967 443 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 KRT7P08729 469 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 RHOXF2BP0C7M4 288 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 PYGMP11217 842 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 TFE3P19532 575 aaPredicted RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 IL1R2P27930 398 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 MIPP30301 263 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 OR1D2P34982 312 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 PCK1P35558 622 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 CETN2P41208 172 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 MATKP42679 507 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 PEX5P50542 639 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 YWHAZP63104 245 aaKnown RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 DSG1Q02413 1049 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 CLUL1Q15846 466 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 DDR2Q16832 855 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 DCAF6Q58WW2 860 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 KCNT1Q5JUK3 1230 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 LRRC38Q5VT99 294 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 OTUD1Q5VV17 481 aaPredicted RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 KAZNQ674X7 775 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SLC8B1Q6J4K2 584 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 CCDC70Q6NSX1 233 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SCYL2Q6P3W7 929 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 VSTM1Q6UX27 236 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 RSRC2Q7L4I2 434 aaKnown RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 POLNQ7Z5Q5 900 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 DDX53Q86TM3 631 aaKnown RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SLC13A5Q86YT5 568 aaPredicted RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 KLHL7Q8IXQ5 586 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 VPS52Q8N1B4 723 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 ARFGAP1Q8N6T3 406 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 EXD1Q8NHP7 514 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SCAMP5Q8TAC9 235 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SLC7A14Q8TBB6 771 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 ADAM32Q8TC27 787 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 GPR152Q8TDT2 470 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 C2orf15Q8WU43 125 aaKnown RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 UBE2Q2Q8WVN8 375 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 IRGQQ8WZA9 623 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 FBXO32Q969P5 355 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 RNF25Q96BH1 459 aaPredicted RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 C8orf48Q96LL4 319 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SLITRK1Q96PX8 696 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SLC2A13Q96QE2 648 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 NAP1L3Q99457 506 aaPredicted RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 RHOXF2Q9BQY4 288 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 UBXN6Q9BZV1 441 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 CRISPLD1Q9H336 500 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 POPDC2Q9HBU9 364 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 GPATCH2LQ9NWQ4 482 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 DDX56Q9NY93 547 aaKnown RBP7.23□□□□□ -1.25
PDAP1-203ENST00000488214 USP18Q9UMW8 372 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 SLC27A5Q9Y2P5 690 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 INSL6Q9Y581 213 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 BACE2Q9Y5Z0 518 aa7.23□□□□□ -1.25
PDAP1-203ENST00000488214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 A0A1W2PQH9 124 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 CCDC188H7C350 402 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 TBC1D4O60343 1298 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 VNN2O95498 520 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 TRUB2O95900 331 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 GLI1P08151 1106 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 LINC00271P0C7V0 271 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 RARAP10276 462 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 HAPLN1P10915 354 aaPredicted RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 RALAP11233 206 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 NCAM1P13591 858 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ATF6P18850 670 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 NOS2P35228 1153 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 RDXP35241 583 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 MAGEA10P43363 369 aaPredicted RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 ATXN1P54253 815 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 CDH6P55285 790 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 HDAC4P56524 1084 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 YWHAGP61981 247 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 USP46P62068 366 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 RPL10AP62906 217 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 DYNLT1P63172 113 aa7.22□□□□□ -1.25
PDAP1-203ENST00000488214 PITX1P78337 314 aaPredicted RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 MRPS25P82663 173 aaKnown RBP7.22□□□□□ -1.25
PDAP1-203ENST00000488214 KRT17Q04695 432 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms