RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MPP3Q13368 585 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 ABCB5Q2M3G0 1257 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 RNF187Q5TA31 235 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-217ENST00000487825 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-217ENST00000487825 FASTKD5Q7L8L6 764 aaKnown RBP5.7□□□□□ -1.5
BRCA1-217ENST00000487825 ANKRD13CQ8N6S4 541 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 DCBLD1Q8N8Z6 715 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 BOD1Q96IK1 185 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 CCDC8Q9H0W5 538 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-217ENST00000487825 C11orf54Q9H0W9 315 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-217ENST00000487825 CASS4Q9NQ75 786 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 TDP1Q9NUW8 608 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 TBCCD1Q9NVR7 557 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 HSFX1Q9UBD0 423 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 KCNE5Q9UJ90 142 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 TRHDEQ9UKU6 1024 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 EPG5Q9HCE0 2579 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 DNAH14Q0VDD8 3507 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 VPS13AQ96RL7 3174 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 KLHL33A6NCF5 533 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 DNM1LO00429 736 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PCDHGA12O60330 932 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PCCAP05165 728 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-217ENST00000487825 CCND3P30281 292 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-217ENST00000487825 WASP42768 502 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 GUCY2FP51841 1108 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 CTXN1P60606 82 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 ITKQ08881 620 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 TARDBPQ13148 414 aaKnown RBP eCLIP5.69□□□□□ -1.5
BRCA1-217ENST00000487825 CYP2A13Q16696 494 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 ERCC6LQ2NKX8 1250 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 SYDE2Q5VT97 1194 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 C15orf52Q6ZUT6 534 aaKnown RBP5.69□□□□□ -1.5
BRCA1-217ENST00000487825 MIGA2Q7L4E1 593 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 ADGRG3Q86Y34 549 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 NUP133Q8WUM0 1156 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 SSH1Q8WYL5 1049 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 MTMR8Q96EF0 704 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PTCD3Q96EY7 689 aaKnown RBP5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PNKPQ96T60 521 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 TMEM74BQ9NUR3 256 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 ZNF112Q9UJU3 913 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PCDHGA9Q9Y5G4 932 aaKnown RBP5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PCDHGA8Q9Y5G5 932 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PCDHGA7Q9Y5G6 932 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PCDHGA6Q9Y5G7 932 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 PCDHGA3Q9Y5H0 932 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 MAST3O60307 1309 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 DMDP11532 3685 aa5.69□□□□□ -1.5
BRCA1-217ENST00000487825 TRIM43BA6NCK2 446 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 ZFPL1O95159 310 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 SBK3P0C264 359 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 FCER1AP12319 257 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 ITGB8P26012 769 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 SLC6A4P31645 630 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 CDKN1CP49918 316 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-217ENST00000487825 SLFN5Q08AF3 891 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 MTMR1Q13613 665 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 ATP2B3Q16720 1220 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 TRIM60Q495X7 471 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 PRR16Q569H4 304 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 FKBP1CQ5VVH2 108 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 Q6ZNX1 250 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 SIMC1Q8NDZ2 872 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 SOCS4Q8WXH5 440 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 HERVK_113Q902F9 699 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 HDAC10Q969S8 669 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 TRIM43Q96BQ3 446 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-217ENST00000487825 AIFM2Q9BRQ8 373 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 ANKRD2Q9GZV1 360 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 UNKLQ9H9P5 680 aaKnown RBP5.68□□□□□ -1.5
BRCA1-217ENST00000487825 RSAD1Q9HA92 442 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 CHPF2Q9P2E5 772 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 TSPYL4Q9UJ04 414 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 LIMCH1Q9UPQ0 1083 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 ZNF236Q9UL36 1845 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 SMCHD1A6NHR9 2005 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 DMXL1Q9Y485 3027 aa5.68□□□□□ -1.5
BRCA1-217ENST00000487825 GRM6O15303 877 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 KATNA1O75449 491 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 CYP2B6P20813 491 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 CDK11BP21127 795 aaKnown RBP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 KCNJ4P48050 445 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 GCLCP48506 637 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 SLC16A1P53985 500 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 CACNB3P54284 484 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 IL10RAQ13651 578 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 PCBP2Q15366 365 aaKnown RBP eCLIP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 GEN1Q17RS7 908 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 SLC39A5Q6ZMH5 540 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 GADL1Q6ZQY3 521 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 ZNF804AQ7Z570 1209 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 CCDC191Q8NCU4 936 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 NLGN4YQ8NFZ3 816 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 LPAR1Q92633 364 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 FUBP1Q96AE4 644 aaKnown RBP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 BBC3Q96PG8 261 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-217ENST00000487825 PRDM13Q9H4Q3 707 aa5.67□□□□□ -1.5
BRCA1-217ENST00000487825 PTGFRNQ9P2B2 879 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms