RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 ENPEPQ07075 957 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 ADAM9Q13443 819 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 PKP1Q13835 747 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 ANO4Q32M45 955 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 RNF43Q68DV7 783 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 TADA2BQ86TJ2 420 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 PGBD3Q8N328 593 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 TXNDC5Q8NBS9 432 aaKnown RBP14.55□□□□□ -0.08
SCAF4-206ENST00000485790 CYFIP2Q96F07 1278 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 HNRNPABQ99729 332 aaKnown RBP14.55□□□□□ -0.08
SCAF4-206ENST00000485790 NT5C1AQ9BXI3 368 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 CCSER2Q9H7U1 834 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 CSNK1G1Q9HCP0 422 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 TMEM30AQ9NV96 361 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 WDR35Q9P2L0 1181 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 LSM7Q9UK45 103 aaKnown RBP14.55□□□□□ -0.08
SCAF4-206ENST00000485790 CIZ1Q9ULV3 898 aaPredicted RBP14.55□□□□□ -0.08
SCAF4-206ENST00000485790 INVSQ9Y283 1065 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 NCOR2Q9Y618 2525 aa14.55□□□□□ -0.08
SCAF4-206ENST00000485790 SCAMP3O14828 347 aaKnown RBP14.54□□□□□ -0.08
SCAF4-206ENST00000485790 STX10O60499 249 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 TLR5O60602 858 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 RHOBTB3O94955 611 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 HLA-DRAP01903 254 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 ZDHHC11BP0C7U3 371 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 NR2F2P24468 414 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 DAB2IPQ5VWQ8 1189 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 HTR3DQ70Z44 454 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 LPCAT2Q7L5N7 544 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 RASSF3Q86WH2 238 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 ALLCQ8N6M5 410 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 IL17RCQ8NAC3 791 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 WHAMMQ8TF30 809 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 SPACA7Q96KW9 195 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 XPO6Q96QU8 1125 aaKnown RBP14.54□□□□□ -0.08
SCAF4-206ENST00000485790 SMOQ99835 787 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.54□□□□□ -0.082e-7■■■■■ 86.9
SCAF4-206ENST00000485790 SPHK2Q9NRA0 654 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 GMIPQ9P107 970 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 HPSEQ9Y251 543 aa14.54□□□□□ -0.08
SCAF4-206ENST00000485790 COL4A2P08572 1712 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 CCDC130P13994 396 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 GTF2H1P32780 548 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 DPP6P42658 865 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 PLA2G4AP47712 749 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 GCLMP48507 274 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 PSEN1P49768 467 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 NDUFA8P51970 172 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 SLC8A3P57103 927 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 NFIL3Q16649 462 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 GAB4Q2WGN9 574 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 SPDYCQ5MJ68 293 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 EMC10Q5UCC4 262 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 TMEM25Q86YD3 366 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 FAM186BQ8IYM0 893 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 GUF1Q8N442 669 aaKnown RBP14.53□□□□□ -0.08
SCAF4-206ENST00000485790 NAT16Q8N8M0 369 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 C12orf29Q8N999 325 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 FAXDC2Q96IV6 333 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 CNTNAP3BQ96NU0 1288 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 LSM14BQ9BX40 385 aaKnown RBP14.53□□□□□ -0.08
SCAF4-206ENST00000485790 CNTNAP3Q9BZ76 1288 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 TPSD1Q9BZJ3 242 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 SDCBP2Q9H190 292 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 PNPLA8Q9NP80 782 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 MAPK8IP1Q9UQF2 711 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 SCML2Q9UQR0 700 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 PCDHA5Q9Y5H7 936 aa14.53□□□□□ -0.08
SCAF4-206ENST00000485790 A0A1W2PQ27 194 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 A0A1W2PQ64 194 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 A0A1W2PQD8 194 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 TM4SF5O14894 197 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 HOXC11O43248 304 aaPredicted RBP14.52□□□□□ -0.09
SCAF4-206ENST00000485790 TULP3O75386 442 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 IRF1P10914 325 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 ACO1P21399 889 aaKnown RBP14.52□□□□□ -0.09
SCAF4-206ENST00000485790 ADORA2BP29275 332 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 KIR2DL1P43626 348 aaPredicted RBP14.52□□□□□ -0.09
SCAF4-206ENST00000485790 ASPAP45381 313 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 DHPSP49366 369 aaPredicted RBP14.52□□□□□ -0.09
SCAF4-206ENST00000485790 PMS2CLQ68D20 193 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 CYP2U1Q7Z449 544 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 BBS7Q8IWZ6 715 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 ELMO3Q96BJ8 720 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 HEXIM2Q96MH2 286 aaKnown RBP14.52□□□□□ -0.09
SCAF4-206ENST00000485790 CDK5RAP1Q96SZ6 601 aaKnown RBP14.52□□□□□ -0.09
SCAF4-206ENST00000485790 FAM49BQ9NUQ9 324 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 DNMT3LQ9UJW3 386 aa14.52□□□□□ -0.09
SCAF4-206ENST00000485790 DNAH14Q0VDD8 3507 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 FAM237AA0A1B0GTK4 181 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 GOLGA6L4A6NEF3 574 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 SGK1O00141 431 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 CETN3O15182 167 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 BEST1O76090 585 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 TBX18O95935 607 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 RALAP11233 206 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 CD58P19256 250 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 KDSRQ06136 332 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 INCA1Q0VD86 236 aa14.51□□□□□ -0.09
SCAF4-206ENST00000485790 ORC1Q13415 861 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms