RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 XKR9Q5GH70 373 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 BTBD8Q5XKL5 378 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 FBXL19Q6PCT2 694 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 CWC27Q6UX04 472 aaKnown RBP6.8□□□□□ -1.32
CAPN13-206ENST00000485248 CCDC186Q7Z3E2 898 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 REXO1Q8N1G1 1221 aaKnown RBP6.8□□□□□ -1.32
CAPN13-206ENST00000485248 TMTC2Q8N394 836 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 ZSCAN1Q8NBB4 408 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 SKA1Q96BD8 255 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 VCPIP1Q96JH7 1222 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 GPR174Q9BXC1 333 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 TSPYL1Q9H0U9 437 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 DHX33Q9H6R0 707 aaKnown RBP6.8□□□□□ -1.32
CAPN13-206ENST00000485248 RPF1Q9H9Y2 349 aaKnown RBP6.8□□□□□ -1.32
CAPN13-206ENST00000485248 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 UXTQ9UBK9 157 aaPredicted RBP6.8□□□□□ -1.32
CAPN13-206ENST00000485248 ADAMTS1Q9UHI8 967 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 CYP46A1Q9Y6A2 500 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 AHCTF1Q8WYP5 2266 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 ATMQ13315 3056 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 MYLKQ15746 1914 aa6.8□□□□□ -1.32
CAPN13-206ENST00000485248 GON4LQ3T8J9 2241 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ANKRD62A6NC57 917 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 MSH4O15457 936 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ADH1CP00326 375 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 OR4Q2P0C623 313 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ACADMP11310 421 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ATP2B1P20020 1258 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 OXTRP30559 389 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 NTSR1P30989 418 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 YWHABP31946 246 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 RPL9P32969 192 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 EIF2DP41214 584 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 TNFSF9P41273 254 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 FANCCQ00597 558 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ST3GAL1Q11201 340 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 GPR17Q13304 367 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 PRPF4BQ13523 1007 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 STARD3Q14849 445 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 IQCB1Q15051 598 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 NAB2Q15742 525 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 KIF19Q2TAC6 998 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 TXNDC8Q6A555 127 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SGMS1Q86VZ5 419 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 NOSTRINQ8IVI9 506 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 LRRC8AQ8IWT6 810 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SRRM1Q8IYB3 904 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 CHPFQ8IZ52 775 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 C17orf53Q8N3J3 647 aaPredicted RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 EXD3Q8N9H8 876 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 FSIP1Q8NA03 581 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 CADM4Q8NFZ8 388 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SCG3Q8WXD2 468 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 DNASE2BQ8WZ79 361 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 EXTL1Q92935 676 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 RNF34Q969K3 372 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SUSD3Q96L08 255 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 PPP1R10Q96QC0 940 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 DEPDC7Q96QD5 511 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 CEP89Q96ST8 783 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 NFKBIZQ9BYH8 718 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 TGIF2Q9GZN2 237 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SLC25A18Q9H1K4 315 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 IL25Q9H293 177 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ZSCAN16Q9H4T2 348 aaPredicted RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 CCSER2Q9H7U1 834 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SENP2Q9HC62 589 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 ZDHHC4Q9NPG8 344 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 PDRG1Q9NUG6 133 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 TMEM51Q9NW97 253 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 IMPACTQ9P2X3 320 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 HSFX1Q9UBD0 423 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 VTI1BQ9UEU0 232 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 EIF2B4Q9UI10 523 aaKnown RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 MAGED2Q9UNF1 606 aaPredicted RBP6.79□□□□□ -1.32
CAPN13-206ENST00000485248 PCDHB6Q9Y5E3 794 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SNX11Q9Y5W9 270 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 SLC12A7Q9Y666 1083 aa6.79□□□□□ -1.32
CAPN13-206ENST00000485248 A0A1B0GTL3 188 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 MTMR11A4FU01 709 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 VPS37CA5D8V6 355 aaPredicted RBP6.78□□□□□ -1.32
CAPN13-206ENST00000485248 BTBD18B2RXH4 712 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 SLC9A3R1O14745 358 aaPredicted RBP6.78□□□□□ -1.32
CAPN13-206ENST00000485248 YKT6O15498 198 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 ADAM23O75077 832 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 SOAT2O75908 522 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 FAM87AP0C7U9 286 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 H2AFXP16104 143 aaPredicted RBP6.78□□□□□ -1.32
CAPN13-206ENST00000485248 RXRAP19793 462 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 GNA11P29992 359 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 OPRD1P41143 372 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 WASP42768 502 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 CSNK1EP49674 416 aaKnown RBP6.78□□□□□ -1.32
CAPN13-206ENST00000485248 ACADVLP49748 655 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 GSDMDP57764 484 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 DAB2P98082 770 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 E2F1Q01094 437 aa6.78□□□□□ -1.32
CAPN13-206ENST00000485248 EHHADHQ08426 723 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms