RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 RAPGEFL1Q9UHV5 662 aa12.34□□□□□ -0.43
CDK5RAP2-217ENST00000484546 ARHGAP26Q9UNA1 814 aa12.34□□□□□ -0.43
CDK5RAP2-217ENST00000484546 CCL26Q9Y258 94 aa12.34□□□□□ -0.43
CDK5RAP2-217ENST00000484546 SH3BP1Q9Y3L3 701 aa12.34□□□□□ -0.43
CDK5RAP2-217ENST00000484546 CPQQ9Y646 472 aa12.34□□□□□ -0.43
CDK5RAP2-217ENST00000484546 MYO16Q9Y6X6 1858 aa12.34□□□□□ -0.43
CDK5RAP2-217ENST00000484546 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 A0A1W2PQH9 124 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 FAM92AA1XBS5 289 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 COCHO43405 550 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ZBED1O96006 694 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 CALCAP01258 141 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 RARGP13631 454 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ATP5C1P36542 298 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 RGS7P49802 495 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SNX16P57768 344 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SLC7A9P82251 487 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PRKCQQ04759 706 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PDGFRLQ15198 375 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SLC44A4Q53GD3 710 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 C10orf120Q5SQS8 335 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SNX30Q5VWJ9 437 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 BTBD8Q5XKL5 378 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 TPRG1Q6ZUI0 275 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 RNF139Q8WU17 664 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ZNF606Q8WXB4 792 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 KCTD13Q8WZ19 329 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 LRRC3BQ96PB8 259 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SLC22A12Q96S37 553 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 STK33Q9BYT3 514 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ULBP1Q9BZM6 244 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SYNCQ9H7C4 482 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 CCSER2Q9H7U1 834 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 TBC1D17Q9HA65 648 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 DUS2Q9NX74 493 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 LSM7Q9UK45 103 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 HCN4Q9Y3Q4 1203 aa12.33□□□□□ -0.44
CDK5RAP2-217ENST00000484546 F8VZ95 297 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 LEFTY2O00292 366 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 TULP2O00295 520 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ARNTLO00327 626 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PIK3R2O00459 728 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SLC9A3R1O14745 358 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 SART1O43290 800 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 FBXO21O94952 628 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 TPM3P06753 285 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ZDHHC11BP0C7U3 371 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PNMA6AP0CW24 399 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 IRF1P10914 325 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 STAT1P42224 750 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ACADSBP45954 432 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 KLK7P49862 253 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 YWHAGP61981 247 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 AMPD2Q01433 879 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 USP4Q13107 963 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 NR1H3Q13133 447 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 IQCB1Q15051 598 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 MEA1Q16626 185 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 RAB41Q5JT25 222 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 C1orf228Q6PIY5 440 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PASD1Q8IV76 773 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 CPA6Q8N4T0 437 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 TMEM105Q8N8V8 129 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 IPO4Q8TEX9 1081 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 MSANTD3Q96H12 275 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 HSFY1Q96LI6 401 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 MIS12Q9H081 205 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 HSD3B7Q9H2F3 369 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 TRPV5Q9NQA5 729 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 CNGB3Q9NQW8 809 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 HEBP1Q9NRV9 189 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 GKN1Q9NS71 199 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 CLIC5Q9NZA1 410 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 CFAP97Q9P2B7 532 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 RASAL2Q9UJF2 1139 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 DNMT3LQ9UJW3 386 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 AJAP1Q9UKB5 411 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 STRIP2Q9ULQ0 834 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 USP3Q9Y6I4 520 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PIAS3Q9Y6X2 628 aa12.32□□□□□ -0.44
CDK5RAP2-217ENST00000484546 LRRC10BA6NIK2 292 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 GFPT2O94808 682 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 OLFM2O95897 454 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 CCDC172P0C7W6 258 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 AOC1P19801 751 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 UBXN2BQ14CS0 331 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ZNF77Q15935 545 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 ITPRIPL2Q3MIP1 535 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 PMF1Q6P1K2 205 aa12.31□□□□□ -0.44
CDK5RAP2-217ENST00000484546 DENND1BQ6P3S1 775 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms