RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 OSCP1Q8WVF1 389 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 EZH1Q92800 747 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 SLC22A12Q96S37 553 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 LINC00597Q9H2U6 94 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 RAB20Q9NX57 234 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 EHD2Q9NZN4 543 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 UXTQ9UBK9 157 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 NXF1Q9UBU9 619 aaKnown RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 EBF1Q9UH73 591 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 ZFHX4Q86UP3 3567 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 LNP1A1A4G5 178 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 A8MXQ7 604 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 PATE3B3GLJ2 98 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 TADA3O75528 432 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 ASPAP45381 313 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 DHPSP49366 369 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 NOP14P78316 857 aaKnown RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 INCA1Q0VD86 236 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 COL9A2Q14055 689 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 ZNF77Q15935 545 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 EML3Q32P44 896 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 CCDC183Q5T5S1 534 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 TCERG1LQ5VWI1 586 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 SCARA3Q6AZY7 606 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 ANO7Q6IWH7 933 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 OSTM1Q86WC4 334 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 SPATA2LQ8IUW3 424 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 TRIM59Q8IWR1 403 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 CCDC33Q8N5R6 958 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 OR6B3Q8NGW1 331 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 TAS1R2Q8TE23 839 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 SH3RF2Q8TEC5 729 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 PIGKQ92643 395 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 ATP2A3Q93084 1043 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 FAM84AQ96KN4 292 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 MRPL45Q9BRJ2 306 aaKnown RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 SRRTQ9BXP5 876 aaKnown RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 NIF3L1Q9GZT8 377 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 THAP9Q9H5L6 903 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 TMEM9BQ9NQ34 198 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 MAGEC2Q9UBF1 373 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-213ENST00000484112 GTF3C4Q9UKN8 822 aa10.6□□□□□ -0.71
CPSF4-213ENST00000484112 ATP8B3O60423 1300 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 CNOT1A5YKK6 2376 aaKnown RBP10.59□□□□□ -0.71
CPSF4-213ENST00000484112 C2orf78A6NCI8 922 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 ANTXRLA6NF34 631 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 TRIM66O15016 1216 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 HCRTO43612 131 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 NOL4O94818 638 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 CLSTN1O94985 981 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 PTPN1P18031 435 aaKnown RBP10.59□□□□□ -0.71
CPSF4-213ENST00000484112 HDCP19113 662 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 BCKDHBP21953 392 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 TBXAS1P24557 533 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-213ENST00000484112 LMO2P25791 158 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 FMO5P49326 533 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 YWHAEP62258 255 aaKnown RBP10.59□□□□□ -0.71
CPSF4-213ENST00000484112 IRX4P78413 519 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 CCDC142Q17RM4 750 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 PMS2CLQ68D20 193 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 KIAA1211LQ6NV74 962 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 ARMCX6Q7L4S7 300 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 CRYBG2Q8N1P7 616 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 B3GALNT2Q8NCR0 500 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 DEFB124Q8NES8 71 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 EEF2KMTQ96G04 330 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 TRMT2BQ96GJ1 504 aaKnown RBP10.59□□□□□ -0.71
CPSF4-213ENST00000484112 SPATA17Q96L03 361 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 FAM81BQ96LP2 452 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 MYRFLQ96LU7 910 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 ADAM33Q9BZ11 813 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 ELOVL4Q9GZR5 314 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.59□□□□□ -0.71
CPSF4-213ENST00000484112 SPAG17Q6Q759 2223 aa10.59□□□□□ -0.71
CPSF4-213ENST00000484112 EML5Q05BV3 1969 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 ZNF638Q14966 1978 aaKnown RBP10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CDX4O14627 284 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-213ENST00000484112 MAP3K13O43283 966 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 LETM1O95202 739 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-213ENST00000484112 AFPP02771 609 aaKnown RBP10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CEACAM1P13688 526 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 PPP3CCP48454 512 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 STX17P56962 302 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 USP4Q13107 963 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 TPD52L1Q16890 204 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-213ENST00000484112 DPCR1Q3MIW9 517 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CBWD6Q4V339 395 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CBWD3Q5JTY5 395 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CBWD5Q5RIA9 395 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 SASS6Q6UVJ0 657 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 C11orf74Q86VG3 221 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 CCDC26Q8TAB7 109 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 ENOX1Q8TC92 643 aaKnown RBP10.58□□□□□ -0.72
CPSF4-213ENST00000484112 USP33Q8TEY7 942 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 RLN3Q8WXF3 142 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 JAKMIP2Q96AA8 810 aa10.58□□□□□ -0.72
CPSF4-213ENST00000484112 PCED1BQ96HM7 432 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms