RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 PRKCQQ04759 706 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 SKOR2Q2VWA4 1001 aaPredicted RBP14.1□□□□□ -0.15
SSR1-208ENST00000483409 ZSCAN23Q3MJ62 389 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 RAB41Q5JT25 222 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 CC2D1AQ6P1N0 951 aaPredicted RBP14.1□□□□□ -0.15
SSR1-208ENST00000483409 TMEM105Q8N8V8 129 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 NDRG1Q92597 394 aaKnown RBP14.1□□□□□ -0.15
SSR1-208ENST00000483409 SHDQ96IW2 340 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 ULBP1Q9BZM6 244 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 RAPGEFL1Q9UHV5 662 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 NAGPAQ9UK23 515 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 WNT6Q9Y6F9 365 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 PIAS3Q9Y6X2 628 aa14.1□□□□□ -0.15
SSR1-208ENST00000483409 FOXN3O00409 490 aaPredicted RBP14.09□□□□□ -0.15
SSR1-208ENST00000483409 PI15O43692 258 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 TBX18O95935 607 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 RARGP13631 454 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 LCP1P13796 627 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 ARSAP15289 507 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 UCHL3P15374 230 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 COL9A1P20849 921 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 AVPR2P30518 371 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 SOX9P48436 509 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 KPNA1P52294 538 aaPredicted RBP14.09□□□□□ -0.15
SSR1-208ENST00000483409 STARD6P59095 220 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 DRAP1Q14919 205 aaPredicted RBP14.09□□□□□ -0.15
SSR1-208ENST00000483409 PMF1Q6P1K2 205 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 DENND1BQ6P3S1 775 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 APTXQ7Z2E3 356 aaKnown RBP14.09□□□□□ -0.15
SSR1-208ENST00000483409 SCD5Q86SK9 330 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 SIX6OS1Q8N1H7 587 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 ZNF606Q8WXB4 792 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 FAM83CQ9BQN1 747 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 TRPV5Q9NQA5 729 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 CYLDQ9NQC7 956 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 HPS4Q9NQG7 708 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 FAM207AQ9NSI2 230 aaPredicted RBP14.09□□□□□ -0.15
SSR1-208ENST00000483409 DUS2Q9NX74 493 aaKnown RBP14.09□□□□□ -0.15
SSR1-208ENST00000483409 CFAP97Q9P2B7 532 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 NUDT5Q9UKK9 219 aa14.09□□□□□ -0.15
SSR1-208ENST00000483409 ATG2BQ96BY7 2078 aa14.08□□□□□ -0.15
SSR1-208ENST00000483409 KANSL1LA0AUZ9 987 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 MDM4O15151 490 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 MED7O43513 233 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 ZBED1O96006 694 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 IRF1P10914 325 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 TCF3P15923 654 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 AOC1P19801 751 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 IFNAR2P48551 515 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 PSEN1P49768 467 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 CLCN5P51795 746 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 UBXN1Q04323 297 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 UBXN2BQ14CS0 331 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 IQCB1Q15051 598 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 SYCP1Q15431 976 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 C10orf120Q5SQS8 335 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 PJA1Q8NG27 643 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 SLC35F5Q8WV83 523 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 OSCP1Q8WVF1 389 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 KCTD13Q8WZ19 329 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 ZFRQ96KR1 1074 aaKnown RBP14.08□□□□□ -0.16
SSR1-208ENST00000483409 PCMTD1Q96MG8 357 aaPredicted RBP14.08□□□□□ -0.16
SSR1-208ENST00000483409 DDX23Q9BUQ8 820 aaKnown RBP14.08□□□□□ -0.16
SSR1-208ENST00000483409 NAA15Q9BXJ9 866 aaKnown RBP14.08□□□□□ -0.16
SSR1-208ENST00000483409 GANQ9H2C0 597 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 CBX8Q9HC52 389 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 PLCB1Q9NQ66 1216 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
SSR1-208ENST00000483409 SIK3Q9Y2K2 1263 aa14.08□□□□□ -0.16
SSR1-208ENST00000483409 MTF2Q9Y483 593 aaPredicted RBP14.08□□□□□ -0.16
SSR1-208ENST00000483409 WDFY4Q6ZS81 3184 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 OTOL1A6NHN0 477 aaPredicted RBP14.07□□□□□ -0.16
SSR1-208ENST00000483409 SHISA7A6NL88 538 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 EPHB6O15197 1021 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 GABBR2O75899 941 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 DCNP07585 359 aaKnown RBP14.07□□□□□ -0.16
SSR1-208ENST00000483409 RALAP11233 206 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 TARSP26639 723 aaKnown RBP14.07□□□□□ -0.16
SSR1-208ENST00000483409 CLCN1P35523 988 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 ATP5C1P36542 298 aaKnown RBP14.07□□□□□ -0.16
SSR1-208ENST00000483409 YWHAGP61981 247 aaKnown RBP eCLIP14.07□□□□□ -0.16
SSR1-208ENST00000483409 PTK2Q05397 1052 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 RUNX3Q13761 415 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 PDGFRLQ15198 375 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 NFKBIBQ15653 356 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 ITPRIPL2Q3MIP1 535 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 PM20D1Q6GTS8 502 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 ZNF852Q6ZMS4 543 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 LUZP1Q86V48 1076 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 SLC47A2Q86VL8 602 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 DDX42Q86XP3 938 aaKnown RBP eCLIP14.07□□□□□ -0.16
SSR1-208ENST00000483409 PASD1Q8IV76 773 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 FAM71AQ8IYT1 594 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 LINC00597Q9H2U6 94 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 LTB4R2Q9NPC1 389 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 ST7Q9NRC1 585 aa14.07□□□□□ -0.16
SSR1-208ENST00000483409 NDRG2Q9UN36 371 aaKnown RBP14.07□□□□□ -0.16
SSR1-208ENST00000483409 SIT1Q9Y3P8 196 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms