RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
HDLBP-239ENST00000483086 NDRG1Q92597 394 aaKnown RBP12.76□□□□□ -0.37
HDLBP-239ENST00000483086 ATP2A3Q93084 1043 aa12.76□□□□□ -0.37
HDLBP-239ENST00000483086 DHTKD1Q96HY7 919 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-239ENST00000483086 P2RY13Q9BPV8 354 aa12.76□□□□□ -0.37
HDLBP-239ENST00000483086 IER2Q9BTL4 223 aa12.76□□□□□ -0.37
HDLBP-239ENST00000483086 DUSP16Q9BY84 665 aa12.76□□□□□ -0.37
HDLBP-239ENST00000483086 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-239ENST00000483086 SCML2Q9UQR0 700 aa12.76□□□□□ -0.37
HDLBP-239ENST00000483086 USP3Q9Y6I4 520 aa12.76□□□□□ -0.37
HDLBP-239ENST00000483086 RNF225M0QZC1 329 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-239ENST00000483086 TRIM24O15164 1050 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 TLR5O60602 858 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 GABBR2O75899 941 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 IRF1P10914 325 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 HNRNPLP14866 589 aaKnown RBP eCLIP12.75□□□□□ -0.37
HDLBP-239ENST00000483086 FMO5P49326 533 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 KIF11P52732 1056 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 CUL2Q13617 745 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 CAMK4Q16566 473 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 HECTD3Q5T447 861 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 ZC3H14Q6PJT7 736 aaKnown RBP12.75□□□□□ -0.37
HDLBP-239ENST00000483086 ARHGEF19Q8IW93 802 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 PDZD8Q8NEN9 1154 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 RPLP0P6Q8NHW5 317 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 NUP205Q92621 2012 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 CD101Q93033 1021 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 CCDC34Q96HJ3 373 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 TMEM176AQ96HP8 235 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 TSG101Q99816 390 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 KLF16Q9BXK1 252 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-239ENST00000483086 IMPG2Q9BZV3 1241 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 SEMA4AQ9H3S1 761 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 PARD6AQ9NPB6 346 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 ZDHHC4Q9NPG8 344 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 CYLDQ9NQC7 956 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 COMMD8Q9NX08 183 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 HCN2Q9UL51 889 aa12.75□□□□□ -0.37
HDLBP-239ENST00000483086 SMG5Q9UPR3 1016 aaKnown RBP12.75□□□□□ -0.37
HDLBP-239ENST00000483086 TNRC6BQ9UPQ9 1833 aaKnown RBP12.74□□□□□ -0.37
HDLBP-239ENST00000483086 PSMA7O14818 248 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 TUBP50607 506 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 GRSF1Q12849 480 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDLBP-239ENST00000483086 RAB41Q5JT25 222 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 LY6G5CQ5SRR4 150 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 ARHGAP17Q68EM7 881 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 TRIM59Q8IWR1 403 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 KIAA2013Q8IYS2 634 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 SYNPOQ8N3V7 929 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 ATRIPQ8WXE1 791 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 TFAP2BQ92481 460 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 FAXDC2Q96IV6 333 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 HEXIM2Q96MH2 286 aaKnown RBP12.74□□□□□ -0.37
HDLBP-239ENST00000483086 CEP63Q96MT8 703 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 PNPLA8Q9NP80 782 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDLBP-239ENST00000483086 THADAQ6YHU6 1953 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 CEP192Q8TEP8 1941 aa12.74□□□□□ -0.37
HDLBP-239ENST00000483086 PLXND1Q9Y4D7 1925 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 NFATC1O95644 943 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 DRD1P21728 446 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 PDE6CP51160 858 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 SEC13P55735 322 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 UBE2HP62256 183 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 APBA1Q02410 837 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 PKDCCQ504Y2 493 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 EMC10Q5UCC4 262 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 PIGZQ86VD9 579 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 TMEM25Q86YD3 366 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 IRF2BP1Q8IU81 584 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 ETFBKMTQ8IXQ9 262 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 KREMEN1Q96MU8 473 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 FAM126AQ9BYI3 521 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-239ENST00000483086 CHMP5Q9NZZ3 219 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 TSPAN16Q9UKR8 245 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 SPTBN2O15020 2390 aa12.73□□□□□ -0.37
HDLBP-239ENST00000483086 E2F8A0AVK6 867 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 O00370 1275 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 PMM2O15305 246 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 STX10O60499 249 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 KLKB1P03952 638 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 RARGP13631 454 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
HDLBP-239ENST00000483086 PDE4CQ08493 712 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 PAK1Q13153 545 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 GOLGA7BQ2TAP0 167 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 FOXR2Q6PJQ5 311 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 Q6ZNB5 142 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 CCDC186Q7Z3E2 898 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 LONP2Q86WA8 852 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 ANKRD52Q8NB46 1076 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 USP33Q8TEY7 942 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 RUBCNQ92622 972 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 SRRTQ9BXP5 876 aaKnown RBP12.72□□□□□ -0.37
HDLBP-239ENST00000483086 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
HDLBP-239ENST00000483086 TLR8Q9NR97 1041 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms