RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.35■□□□□ 0.69
SMIM4-204ENST00000482728 M0QYV0 167 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 TULP2O00295 520 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 SLC9A3R1O14745 358 aaPredicted RBP19.34■□□□□ 0.69
SMIM4-204ENST00000482728 ZBED1O96006 694 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 DCNP07585 359 aaKnown RBP19.34■□□□□ 0.69
SMIM4-204ENST00000482728 RARGP13631 454 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 PLA2G4AP47712 749 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 PGFP49763 221 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 AMPD2Q01433 879 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 USP4Q13107 963 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 NR1H3Q13133 447 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 SKOR2Q2VWA4 1001 aaPredicted RBP19.34■□□□□ 0.69
SMIM4-204ENST00000482728 RAB41Q5JT25 222 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 C10orf120Q5SQS8 335 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 TRIM68Q6AZZ1 485 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 TADA2BQ86TJ2 420 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 SIX6OS1Q8N1H7 587 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 AOPEPQ8N6M6 819 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 RIN3Q8TB24 985 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 SHC3Q92529 594 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 ZSWIM1Q9BR11 485 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 NMUR1Q9HB89 426 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 SIX2Q9NPC8 291 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 NDRG2Q9UN36 371 aaKnown RBP19.34■□□□□ 0.69
SMIM4-204ENST00000482728 WNT6Q9Y6F9 365 aa19.34■□□□□ 0.69
SMIM4-204ENST00000482728 TICRRQ7Z2Z1 1910 aa19.33■□□□□ 0.69
SMIM4-204ENST00000482728 SMTNL1A8MU46 457 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 SPECC1L-ADORA2AF8WAN1 911 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 THAP12O43422 761 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 ARSAP15289 507 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 GNA15P30679 374 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 SOX9P48436 509 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 PTK2Q05397 1052 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 KCNMA1Q12791 1236 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 PKDCCQ504Y2 493 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 SMYD5Q6GMV2 418 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 CPA6Q8N4T0 437 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 KIAA1958Q8N8K9 716 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 SLC35F5Q8WV83 523 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 ZNF606Q8WXB4 792 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 KCTD13Q8WZ19 329 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 SECISBP2LQ93073 1101 aaKnown RBP19.33■□□□□ 0.68
SMIM4-204ENST00000482728 ATP2A3Q93084 1043 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 CDK5RAP1Q96SZ6 601 aaKnown RBP19.33■□□□□ 0.68
SMIM4-204ENST00000482728 LSM14BQ9BX40 385 aaKnown RBP19.33■□□□□ 0.68
SMIM4-204ENST00000482728 ULBP1Q9BZM6 244 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 LINC00597Q9H2U6 94 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 CYLDQ9NQC7 956 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 HPS4Q9NQG7 708 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMIM4-204ENST00000482728 CLIC5Q9NZA1 410 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 DNMT3LQ9UJW3 386 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 SH3BP1Q9Y3L3 701 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 MTF2Q9Y483 593 aaPredicted RBP19.33■□□□□ 0.68
SMIM4-204ENST00000482728 CACNA1HO95180 2353 aa19.33■□□□□ 0.68
SMIM4-204ENST00000482728 FOXN3O00409 490 aaPredicted RBP19.32■□□□□ 0.68
SMIM4-204ENST00000482728 TBX18O95935 607 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 LCP1P13796 627 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 TARSP26639 723 aaKnown RBP19.32■□□□□ 0.68
SMIM4-204ENST00000482728 CTHP32929 405 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 RGS7P49802 495 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 COPB1P53618 953 aaKnown RBP19.32■□□□□ 0.68
SMIM4-204ENST00000482728 ZXDBP98169 803 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 GOLGA8FQ08AF8 430 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 GOLGA8DPQ0D2H9 430 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 ADIGQ0VDE8 80 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 RAPGEF1Q13905 1077 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 KLHDC7AQ5VTJ3 777 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 PM20D1Q6GTS8 502 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 RSRC2Q7L4I2 434 aaKnown RBP19.32■□□□□ 0.68
SMIM4-204ENST00000482728 SCD5Q86SK9 330 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 DTWD2Q8NBA8 298 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 BPIFA3Q9BQP9 254 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 OSER1Q9NX31 292 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 LIMA1Q9UHB6 759 aaKnown RBP19.32■□□□□ 0.68
SMIM4-204ENST00000482728 ARIH1Q9Y4X5 557 aaPredicted RBP19.32■□□□□ 0.68
SMIM4-204ENST00000482728 PATJQ8NI35 1801 aa19.32■□□□□ 0.68
SMIM4-204ENST00000482728 E2F8A0AVK6 867 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 SYCE3A1L190 88 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 BECN2A8MW95 431 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 GALR2O43603 387 aaPredicted RBP19.31■□□□□ 0.68
SMIM4-204ENST00000482728 NFATC1O95644 943 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 ZNF165P49910 485 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 BPIFB4P59827 614 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 YWHAGP61981 247 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMIM4-204ENST00000482728 NCAPHQ15003 741 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 EML3Q32P44 896 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 PMF1Q6P1K2 205 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 KLHDC10Q6PID8 442 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 CCDC105Q8IYK2 499 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 ZNF276Q8N554 614 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 EXOC4Q96A65 974 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 HSFY1Q96LI6 401 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 PCMTD1Q96MG8 357 aaPredicted RBP19.31■□□□□ 0.68
SMIM4-204ENST00000482728 ECT2Q9H8V3 914 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 CNGB3Q9NQW8 809 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 ST7Q9NRC1 585 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 TBC1D14Q9P2M4 693 aa19.31■□□□□ 0.68
SMIM4-204ENST00000482728 NUDT5Q9UKK9 219 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms