RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 DACH1Q9UI36 760 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 NUDT5Q9UKK9 219 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 TSPAN16Q9UKR8 245 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 FBXO4Q9UKT5 387 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 MYO15AQ9UKN7 3530 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 TRDMT1O14717 391 aaKnown RBP17.44■□□□□ 0.38
VAMP4-204ENST00000482519 SLC9A3R1O14745 358 aaPredicted RBP17.44■□□□□ 0.38
VAMP4-204ENST00000482519 GFRA3O60609 400 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 CALCAP01258 141 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 VDRP11473 427 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 RARGP13631 454 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 ATP5C1P36542 298 aaKnown RBP17.44■□□□□ 0.38
VAMP4-204ENST00000482519 CCINQ13939 588 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 PPP2R5DQ14738 602 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 HSP90AA4PQ58FG1 418 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 TMEM196Q5HYL7 178 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 C10orf120Q5SQS8 335 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 FSTL4Q6MZW2 842 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 ZC3H14Q6PJT7 736 aaKnown RBP17.44■□□□□ 0.38
VAMP4-204ENST00000482519 TTC30AQ86WT1 665 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 EXOC4Q96A65 974 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 NMUR1Q9HB89 426 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 FBRSL1Q9HCM7 1045 aaKnown RBP17.44■□□□□ 0.38
VAMP4-204ENST00000482519 UBE2TQ9NPD8 197 aaPredicted RBP17.44■□□□□ 0.38
VAMP4-204ENST00000482519 KIAA1257Q9ULG3 409 aa17.44■□□□□ 0.38
VAMP4-204ENST00000482519 RNF225M0QZC1 329 aaPredicted RBP17.43■□□□□ 0.38
VAMP4-204ENST00000482519 TULP2O00295 520 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 MDM4O15151 490 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 EGFP01133 1207 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 KRT5P13647 590 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 CXCL12P48061 93 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 CCR3P51677 355 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 TKTL1P51854 596 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 BCAT1P54687 386 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 SATB1Q01826 763 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 PDE4CQ08493 712 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 GAS6Q14393 721 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 IRF2BP1Q8IU81 584 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 ADGRG2Q8IZP9 1017 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 SPEM1Q8N4L4 309 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 RBBP8NLQ8NC74 664 aaPredicted RBP17.43■□□□□ 0.38
VAMP4-204ENST00000482519 GPT2Q8TD30 523 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 ATRIPQ8WXE1 791 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 TFAP2BQ92481 460 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 CD101Q93033 1021 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 ZFRQ96KR1 1074 aaKnown RBP17.43■□□□□ 0.38
VAMP4-204ENST00000482519 IER2Q9BTL4 223 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 UBXN6Q9BZV1 441 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 TBC1D14Q9P2M4 693 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 ATG2BQ96BY7 2078 aa17.43■□□□□ 0.38
VAMP4-204ENST00000482519 VPS13AQ96RL7 3174 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 E2F8A0AVK6 867 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 PROB1E7EW31 1015 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 O00370 1275 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 CYP17A1P05093 508 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 PAEPP09466 180 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 RALAP11233 206 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 GCNT1Q02742 428 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 BST2Q10589 180 aaKnown RBP17.42■□□□□ 0.38
VAMP4-204ENST00000482519 DHCR24Q15392 516 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 ZNF528Q3MIS6 628 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 ASCL5Q7RTU5 278 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 CCDC186Q7Z3E2 898 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 SCD5Q86SK9 330 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 MIB1Q86YT6 1006 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 SYNPOQ8N3V7 929 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 WBP2Q969T9 261 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 THAP9Q9H5L6 903 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 LRRC4Q9HBW1 653 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 CYLDQ9NQC7 956 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 PRMT8Q9NR22 394 aaPredicted RBP17.42■□□□□ 0.38
VAMP4-204ENST00000482519 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.42■□□□□ 0.38
VAMP4-204ENST00000482519 DNMT3LQ9UJW3 386 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 USP3Q9Y6I4 520 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 DMDP11532 3685 aa17.42■□□□□ 0.38
VAMP4-204ENST00000482519 XPO1O14980 1071 aaKnown RBP17.41■□□□□ 0.38
VAMP4-204ENST00000482519 ZBED1O96006 694 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 ADH1CP00326 375 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 DRD1P21728 446 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 BRD2P25440 801 aaKnown RBP17.41■□□□□ 0.38
VAMP4-204ENST00000482519 ERCC5P28715 1186 aaPredicted RBP17.41■□□□□ 0.38
VAMP4-204ENST00000482519 PSEN1P49768 467 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 GOLGA8FQ08AF8 430 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 GOLGA8DPQ0D2H9 430 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 GJB7Q6PEY0 223 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 GBP6Q6ZN66 633 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 RSRC2Q7L4I2 434 aaKnown RBP17.41■□□□□ 0.38
VAMP4-204ENST00000482519 TADA2BQ86TJ2 420 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 FAM114A1Q8IWE2 563 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 BBS7Q8IWZ6 715 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 NDRG1Q92597 394 aaKnown RBP17.41■□□□□ 0.38
VAMP4-204ENST00000482519 KREMEN1Q96MU8 473 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 KLF16Q9BXK1 252 aaPredicted RBP17.41■□□□□ 0.38
VAMP4-204ENST00000482519 USP34Q70CQ2 3546 aa17.41■□□□□ 0.38
VAMP4-204ENST00000482519 MYOFQ9NZM1 2061 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 PRR23AA6NEV1 266 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 M0QYV0 167 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 PIK3R2O00459 728 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 RNF40O75150 1001 aa17.4■□□□□ 0.38
VAMP4-204ENST00000482519 LCP1P13796 627 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms