RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 UBALD2Q8IYN6 164 aa26.28■■□□□ 1.8
PERM1-203ENST00000479361 DEPDC1BQ8WUY9 529 aa26.28■■□□□ 1.8
PERM1-203ENST00000479361 IRGQQ8WZA9 623 aa26.28■■□□□ 1.8
PERM1-203ENST00000479361 SLC22A12Q96S37 553 aa26.28■■□□□ 1.8
PERM1-203ENST00000479361 NACA2Q9H009 215 aa26.28■■□□□ 1.8
PERM1-203ENST00000479361 NUCKS1Q9H1E3 243 aaKnown RBP26.28■■□□□ 1.8
PERM1-203ENST00000479361 LRRC53A6NM62 1247 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 SART1O43290 800 aaKnown RBP26.27■■□□□ 1.8
PERM1-203ENST00000479361 DCXO43602 365 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 OLFM2O95897 454 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 MMEP08473 750 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 ALADP13716 330 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 YWHAGP61981 247 aaKnown RBP eCLIP26.27■■□□□ 1.8
PERM1-203ENST00000479361 SPECC1LQ69YQ0 1117 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 SCD5Q86SK9 330 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 TMEM110Q86TL2 294 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 WDTC1Q8N5D0 677 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 C1orf131Q8NDD1 294 aaKnown RBP26.27■■□□□ 1.8
PERM1-203ENST00000479361 USP13Q92995 863 aaPredicted RBP26.27■■□□□ 1.8
PERM1-203ENST00000479361 PPP1R13BQ96KQ4 1090 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 RPP25Q9BUL9 199 aaKnown RBP26.27■■□□□ 1.8
PERM1-203ENST00000479361 SMG9Q9H0W8 520 aaKnown RBP26.27■■□□□ 1.8
PERM1-203ENST00000479361 CCSER2Q9H7U1 834 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 NMUR1Q9HB89 426 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 CYTH4Q9UIA0 394 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 ARHGAP26Q9UNA1 814 aa26.27■■□□□ 1.8
PERM1-203ENST00000479361 PIK3R2O00459 728 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 COCHO43405 550 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 GABBR2O75899 941 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 RARGP13631 454 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 PSMC3P17980 439 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 CDH5P33151 784 aaPredicted RBP26.26■■□□□ 1.79
PERM1-203ENST00000479361 PGFP49763 221 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 DAOAP59103 153 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 SLC7A9P82251 487 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 ASIC2Q16515 512 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 SFMBT2Q5VUG0 894 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 VITQ6UXI7 678 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 TRIM72Q6ZMU5 477 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 GPIHBP1Q8IV16 184 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 MFSD6LQ8IWD5 586 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 YAF2Q8IY57 180 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 ZNF276Q8N554 614 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 SLC20A1Q8WUM9 679 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 GOLGA1Q92805 767 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 TRIM5Q9C035 493 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 RNF38Q9H0F5 515 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.26■■□□□ 1.79
PERM1-203ENST00000479361 OSER1Q9NX31 292 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 AIPL1Q9NZN9 384 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 DUSP12Q9UNI6 340 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 BDP1A6H8Y1 2624 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 ANAPC1Q9H1A4 1944 aa26.26■■□□□ 1.79
PERM1-203ENST00000479361 NUP210Q8TEM1 1887 aaPredicted RBP26.25■■□□□ 1.79
PERM1-203ENST00000479361 E5RJQ4 531 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 MBL2P11226 248 aaPredicted RBP26.25■■□□□ 1.79
PERM1-203ENST00000479361 SRFP11831 508 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 ATP5C1P36542 298 aaKnown RBP26.25■■□□□ 1.79
PERM1-203ENST00000479361 TRIM14Q14142 442 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 KLHDC10Q6PID8 442 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 SCUBE3Q8IX30 993 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 MSANTD4Q8NCY6 345 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 BPIFB1Q8TDL5 484 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 IPO4Q8TEX9 1081 aaKnown RBP26.25■■□□□ 1.79
PERM1-203ENST00000479361 TRMT61BQ9BVS5 477 aaKnown RBP26.25■■□□□ 1.79
PERM1-203ENST00000479361 PLA2G2FQ9BZM2 168 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 MIS12Q9H081 205 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 SYNCQ9H7C4 482 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 THG1LQ9NWX6 298 aaKnown RBP26.25■■□□□ 1.79
PERM1-203ENST00000479361 CAPN11Q9UMQ6 739 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 MYO16Q9Y6X6 1858 aa26.25■■□□□ 1.79
PERM1-203ENST00000479361 ZBED6P86452 979 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 C10orf120Q5SQS8 335 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 BTBD8Q5XKL5 378 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 RSRC2Q7L4I2 434 aaKnown RBP26.24■■□□□ 1.79
PERM1-203ENST00000479361 BHLHA9Q7RTU4 235 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 IRF2BP2Q7Z5L9 587 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 DDX42Q86XP3 938 aaKnown RBP eCLIP26.24■■□□□ 1.79
PERM1-203ENST00000479361 RSPRY1Q96DX4 576 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 CPXM1Q96SM3 734 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 TRIM62Q9BVG3 475 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 DNMT3LQ9UJW3 386 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 CCL26Q9Y258 94 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 LUC7L2Q9Y383 392 aaKnown RBP26.24■■□□□ 1.79
PERM1-203ENST00000479361 CPQQ9Y646 472 aa26.24■■□□□ 1.79
PERM1-203ENST00000479361 YJEFN3A6XGL0 299 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 E7ENQ6 273 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 TPM1P09493 284 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 TCF3P15923 654 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 CHRNB2P17787 502 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 FMO1Q01740 532 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 FCHO2Q0JRZ9 810 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 BSPRYQ5W0U4 402 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 VSTM4Q8IW00 320 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 CPLX3Q8WVH0 158 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 NDRG1Q92597 394 aaKnown RBP26.23■■□□□ 1.79
PERM1-203ENST00000479361 SYN2Q92777 582 aaPredicted RBP26.23■■□□□ 1.79
PERM1-203ENST00000479361 ABCC13Q9NSE7 274 aa26.23■■□□□ 1.79
PERM1-203ENST00000479361 OLA1Q9NTK5 396 aaKnown RBP26.23■■□□□ 1.79
PERM1-203ENST00000479361 GYPCP04921 128 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms