RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SIX5Q8N196 739 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 OTUB2Q96DC9 234 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 PRRX2Q99811 253 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 LRRC4Q9HBW1 653 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
C9orf3-217ENST00000479161 MRPS17Q9Y2R5 130 aaKnown RBP16.28■□□□□ 0.2
C9orf3-217ENST00000479161 E2F8A0AVK6 867 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 SLC9A3R1O14745 358 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-217ENST00000479161 FBXO21O94952 628 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 RALAP11233 206 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 AOC1P19801 751 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 BRD2P25440 801 aaKnown RBP16.27■□□□□ 0.2
C9orf3-217ENST00000479161 ATP5C1P36542 298 aaKnown RBP16.27■□□□□ 0.2
C9orf3-217ENST00000479161 MAGEA9P43362 315 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 TKTL1P51854 596 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 AMPD2Q01433 879 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 MTF1Q14872 753 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 DRAP1Q14919 205 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-217ENST00000479161 CC2D1AQ6P1N0 951 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-217ENST00000479161 BEND5Q7L4P6 421 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 SCD5Q86SK9 330 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 RALGPS2Q86X27 583 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-217ENST00000479161 CSGALNACT1Q8TDX6 532 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 SH3RF2Q8TEC5 729 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 OSCP1Q8WVF1 389 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 ZFRQ96KR1 1074 aaKnown RBP16.27■□□□□ 0.2
C9orf3-217ENST00000479161 SLC4A5Q9BY07 1137 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 GANQ9H2C0 597 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 MFSD1Q9H3U5 465 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 GKN1Q9NS71 199 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 TBC1D14Q9P2M4 693 aa16.27■□□□□ 0.2
C9orf3-217ENST00000479161 MIA3Q5JRA6 1907 aa16.27■□□□□ 0.19
C9orf3-217ENST00000479161 KMT2EQ8IZD2 1858 aa16.27■□□□□ 0.19
C9orf3-217ENST00000479161 CACNA1HO95180 2353 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 KANSL1LA0AUZ9 987 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 FAM86C2PA6NEL3 165 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 M0QYV0 167 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 LEFTY2O00292 366 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 CYP26A1O43174 497 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 SART1O43290 800 aaKnown RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 ABL1P00519 1130 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 CLCN1P35523 988 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 ZXDBP98169 803 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 APBA1Q02410 837 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 IFRD2Q12894 506 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 FILIP1LQ4L180 1135 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 PMF1Q6P1K2 205 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 ZNF852Q6ZMS4 543 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 TMEM110Q86TL2 294 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 ST13P5Q8NFI4 369 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 UBA3Q8TBC4 463 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 SECISBP2LQ93073 1101 aaKnown RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 LSM14BQ9BX40 385 aaKnown RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 SMG9Q9H0W8 520 aaKnown RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 OLA1Q9NTK5 396 aaKnown RBP16.26■□□□□ 0.19
C9orf3-217ENST00000479161 DNMT3LQ9UJW3 386 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 FHOD1Q9Y613 1164 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 CPQQ9Y646 472 aa16.26■□□□□ 0.19
C9orf3-217ENST00000479161 A0A1W2PQC6 194 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 SHISA7A6NL88 538 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 F8VZ95 297 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 TULP2O00295 520 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 THAP12O43422 761 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 MBL2P11226 248 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-217ENST00000479161 RARGP13631 454 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 ATP1A3P13637 1013 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 AVPR2P30518 371 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 JAM2P57087 298 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 SNX16P57768 344 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 TPM4P67936 248 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 UBXN1Q04323 297 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 GOLGA8FQ08AF8 430 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 GOLGA8DPQ0D2H9 430 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 RUNX3Q13761 415 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 CWF19L1Q69YN2 538 aaKnown RBP16.25■□□□□ 0.19
C9orf3-217ENST00000479161 HTR3DQ70Z44 454 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 ZNF677Q86XU0 584 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 SIX6OS1Q8N1H7 587 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 RIN3Q8TB24 985 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 ATP2A3Q93084 1043 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 TRIM62Q9BVG3 475 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 KLF16Q9BXK1 252 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-217ENST00000479161 ULBP1Q9BZM6 244 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 CCSER2Q9H7U1 834 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 TBC1D17Q9HA65 648 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 NMUR1Q9HB89 426 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 CBX8Q9HC52 389 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 HEBP1Q9NRV9 189 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 ABCC13Q9NSE7 274 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 OSER1Q9NX31 292 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 NAGPAQ9UK23 515 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 AJAP1Q9UKB5 411 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-217ENST00000479161 CA14Q9ULX7 337 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
C9orf3-217ENST00000479161 A0A1B0GTH6 734 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 A0A1W2PQH9 124 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms