RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 CXCL16Q9H2A7 254 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 NXF3Q9H4D5 531 aaKnown RBP28.73■■■□□ 2.19
CHKB-208ENST00000479003 ASB7Q9H672 318 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 TRMT13Q9NUP7 481 aaKnown RBP28.73■■■□□ 2.19
CHKB-208ENST00000479003 SNTG2Q9NY99 539 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 FETUBQ9UGM5 382 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 AGAP1Q9UPQ3 857 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 SMG5Q9UPR3 1016 aaKnown RBP28.73■■■□□ 2.19
CHKB-208ENST00000479003 M0QZ92 97 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 CHRNA1P02708 482 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 GPX6P59796 221 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 RSPH3Q86UC2 560 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 RSAD2Q8WXG1 361 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 TRPV2Q9Y5S1 764 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 SPAG7O75391 227 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 TRUB2O95900 331 aaKnown RBP28.72■■■□□ 2.19
CHKB-208ENST00000479003 KRT15P19012 456 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 MIPP30301 263 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 AXLP30530 894 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 RPL22P35268 128 aaKnown RBP28.72■■■□□ 2.19
CHKB-208ENST00000479003 ARL4CP56559 192 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 ANKRD22Q5VYY1 191 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 CAPN12Q6ZSI9 719 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 KCTD6Q8NC69 237 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 SENP6Q9GZR1 1112 aaPredicted RBP28.72■■■□□ 2.19
CHKB-208ENST00000479003 C10orf88Q9H8K7 445 aa28.72■■■□□ 2.19
CHKB-208ENST00000479003 PSMC3IPQ9P2W1 217 aaPredicted RBP28.72■■■□□ 2.19
CHKB-208ENST00000479003 ZMYND8Q9ULU4 1186 aaPredicted RBP28.72■■■□□ 2.19
CHKB-208ENST00000479003 CLUHO75153 1309 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 GOLGA8MH3BSY2 632 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 CABYRO75952 493 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 VDRP11473 427 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 RDXP35241 583 aaKnown RBP28.71■■■□□ 2.19
CHKB-208ENST00000479003 GPD2P43304 727 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 RNF43Q68DV7 783 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 SMC6Q96SB8 1091 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 PCSK1NQ9UHG2 260 aa28.71■■■□□ 2.19
CHKB-208ENST00000479003 MOXD2PA6NHM9 499 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 APOC4-APOC2K7ER74 178 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 M0QYV0 167 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 BANF1O75531 89 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 RNF8O76064 485 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 APOC2P02655 101 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 RFX6Q8HWS3 928 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 ANKMY2Q8IV38 441 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 TRIM6Q9C030 488 aaPredicted RBP28.7■■■□□ 2.19
CHKB-208ENST00000479003 CD248Q9HCU0 757 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 GGT7Q9UJ14 662 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 RABGEF1Q9UJ41 708 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 USP18Q9UMW8 372 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 TRIP11Q15643 1979 aa28.7■■■□□ 2.19
CHKB-208ENST00000479003 E7ESA3 106 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 SMAPO00193 183 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 P4HA1P13674 534 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 NCALDP61601 193 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 GAD2Q05329 585 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 BNIP1Q12981 228 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 SPARCL1Q14515 664 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 RGS9BPQ6ZS82 235 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 GLT1D1Q96MS3 346 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 PITPNM3Q9BZ71 974 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 KIF9Q9HAQ2 790 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 RXFP1Q9HBX9 757 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 ASNSD1Q9NWL6 643 aa28.7■■■□□ 2.18
CHKB-208ENST00000479003 MYCP01106 439 aaPredicted RBP28.69■■■□□ 2.18
CHKB-208ENST00000479003 PHBP35232 272 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 PCK1P35558 622 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 THPOP40225 353 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 GEMIN4P57678 1058 aaKnown RBP28.69■■■□□ 2.18
CHKB-208ENST00000479003 MGAT3Q09327 533 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 FNBP1LQ5T0N5 605 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 UBXN11Q5T124 520 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 APBB1IPQ7Z5R6 666 aaPredicted RBP28.69■■■□□ 2.18
CHKB-208ENST00000479003 RPAINQ86UA6 219 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 UNC45BQ8IWX7 931 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 ATP11CQ8NB49 1132 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 MAGEC3Q8TD91 643 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 PYROXD1Q8WU10 500 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.69■■■□□ 2.183e-11■□□□□ 9.9
CHKB-208ENST00000479003 KLHL14Q9P2G3 628 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 TMEM132DQ14C87 1099 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 TAF5Q15542 800 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 MSS51Q4VC12 460 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 CCDC91Q7Z6B0 441 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 HSPH1Q92598 858 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 PAIP2Q9BPZ3 127 aaKnown RBP28.69■■■□□ 2.18
CHKB-208ENST00000479003 RSAD1Q9HA92 442 aa28.69■■■□□ 2.18
CHKB-208ENST00000479003 A0A1W2PQ45 241 aaPredicted RBP28.68■■■□□ 2.18
CHKB-208ENST00000479003 A0A1W2PQY0 241 aa28.68■■■□□ 2.18
CHKB-208ENST00000479003 EIF3EP60228 445 aaKnown RBP28.68■■■□□ 2.18
CHKB-208ENST00000479003 FITM2Q8N6M3 262 aa28.68■■■□□ 2.18
CHKB-208ENST00000479003 HPDLQ96IR7 371 aa28.68■■■□□ 2.18
CHKB-208ENST00000479003 UNC93B1Q9H1C4 597 aa28.68■■■□□ 2.18
CHKB-208ENST00000479003 ECT2Q9H8V3 914 aa28.68■■■□□ 2.18
CHKB-208ENST00000479003 TYROBPO43914 113 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 ENDOD1O94919 500 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 ZNF143P52747 638 aaPredicted RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 INCA1Q0VD86 236 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 FAM102AQ5T9C2 384 aaPredicted RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 C4orf33Q8N1A6 199 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms