RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 ZNF132P52740 706 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 USP46P62068 366 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 IFRD2Q12894 506 aaPredicted RBP8.36□□□□□ -1.07
DDX39B-218ENST00000478365 GRM2Q14416 872 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 PPP2R5DQ14738 602 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 MTF1Q14872 753 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 ZNF77Q15935 545 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 GOLGA7BQ2TAP0 167 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 CDKAL1Q5VV42 579 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 TPRG1Q6ZUI0 275 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 SIX6OS1Q8N1H7 587 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 SYNPOQ8N3V7 929 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 RBBP8NLQ8NC74 664 aaPredicted RBP8.36□□□□□ -1.07
DDX39B-218ENST00000478365 ZMIZ2Q8NF64 920 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 PJA1Q8NG27 643 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 SH3RF2Q8TEC5 729 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 OSCP1Q8WVF1 389 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 KCTD13Q8WZ19 329 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 IRGQQ8WZA9 623 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 GOLGA1Q92805 767 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 HSFY1Q96LI6 401 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 KCNK16Q96T55 309 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 RPP25Q9BUL9 199 aaKnown RBP8.36□□□□□ -1.07
DDX39B-218ENST00000478365 LTB4R2Q9NPC1 389 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 UBE2TQ9NPD8 197 aaPredicted RBP8.36□□□□□ -1.07
DDX39B-218ENST00000478365 CNGB3Q9NQW8 809 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 CALCOCO1Q9P1Z2 691 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 LSM7Q9UK45 103 aaKnown RBP8.36□□□□□ -1.07
DDX39B-218ENST00000478365 TSPAN16Q9UKR8 245 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 STRIP2Q9ULQ0 834 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 SIT1Q9Y3P8 196 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 CEP83Q9Y592 693 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 USP3Q9Y6I4 520 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 PIAS3Q9Y6X2 628 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 KMT2EQ8IZD2 1858 aa8.36□□□□□ -1.07
DDX39B-218ENST00000478365 TICRRQ7Z2Z1 1910 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 KRBA1A5PL33 1030 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 C2orf78A6NCI8 922 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 HHLA1C9JL84 531 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ARNTLO00327 626 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 GALR2O43603 387 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ZNF500O60304 480 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 TLR5O60602 858 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ZBED1O96006 694 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ADH1CP00326 375 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ABL1P00519 1130 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 MBL2P11226 248 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 PON1P27169 355 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ATP5C1P36542 298 aaKnown RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 CACNA2D1P54289 1103 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 PTK2Q05397 1052 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 TYRO3Q06418 890 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ORC1Q13415 861 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 RUNX3Q13761 415 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 UBXN2BQ14CS0 331 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 RAB41Q5JT25 222 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 DGKKQ5KSL6 1271 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 CWF19L1Q69YN2 538 aaKnown RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 CAVIN1Q6NZI2 390 aaKnown RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 MAMSTRQ6ZN01 415 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 PIGZQ86VD9 579 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 CCDC105Q8IYK2 499 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ARL14EPQ8N8R7 260 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 SCAMP5Q8TAC9 235 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 STK32AQ8WU08 396 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 SHC3Q92529 594 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 NOX5Q96PH1 765 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 MED15Q96RN5 788 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 PPP1R9BQ96SB3 815 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 FAM83CQ9BQN1 747 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 PLA2G2FQ9BZM2 168 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 DCLK3Q9C098 648 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 MIS12Q9H081 205 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 PLCB1Q9NQ66 1216 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 TMEM30AQ9NV96 361 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 DUS2Q9NX74 493 aaKnown RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 GMIPQ9P107 970 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 DNMT3LQ9UJW3 386 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 ZNF510Q9Y2H8 683 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 SH3BP1Q9Y3L3 701 aa8.35□□□□□ -1.07
DDX39B-218ENST00000478365 RIF1Q5UIP0 2472 aaKnown RBP8.35□□□□□ -1.07
DDX39B-218ENST00000478365 CACNA1IQ9P0X4 2223 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 BECN2A8MW95 431 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-218ENST00000478365 SPECC1L-ADORA2AF8WAN1 911 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 M0QYV0 167 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 LEFTY2O00292 366 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 NRG2O14511 850 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-218ENST00000478365 COCHO43405 550 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 LRRN2O75325 713 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 GNA15P30679 374 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 CTHP32929 405 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 EIF2DP41214 584 aaKnown RBP8.34□□□□□ -1.07
DDX39B-218ENST00000478365 TKTL1P51854 596 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 CDR1P51861 262 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 ZNF445P59923 1031 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 COG7P83436 770 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 GRSF1Q12849 480 aaKnown RBP eCLIP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms