RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, human

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-212	ENST00000478288	IKBKB	O14920	756 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	KLRC4	O43908	158 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	VNN1	O95497	513 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	F13A1	P00488	732 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	SLFN14	P0C7P3	912 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	BCKDHB	P21953	392 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	CASP1	P29466	404 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	HOXD12	P35452	270 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	SLC6A11	P48066	632 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	CASP4	P49662	377 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	MESP2	Q0VG99	397 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	IFRD2	Q12894	506 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	BYSL	Q13895	437 aa	Known RBP	13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	SGSM1	Q2NKQ1	1148 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	NUDT18	Q6ZVK8	323 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	UNC93A	Q86WB7	457 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	CEP57L1	Q8IYX8	460 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	CRYBG2	Q8N1P7	616 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	CCDC33	Q8N5R6	958 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	KIAA0895	Q8NCT3	520 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	SCAMP5	Q8TAC9	235 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	KRT82	Q9NSB4	513 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	SH3BP1	Q9Y3L3	701 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	PKD1L2	Q7Z442	2459 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	DMXL2	Q8TDJ6	3036 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	AKAP13	Q12802	2813 aa		13.76	□□□□□ -0.21
ABCF3-212	ENST00000478288	PDXK	O00764	312 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	MAPK13	O15264	365 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	ADAM23	O75077	832 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	AP1G2	O75843	785 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	KRT37	O76014	449 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	KLF8	O95600	359 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	ASS1	P00966	412 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	TRIM21	P19474	475 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	CSRP1	P21291	193 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	KCNA4	P22459	653 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	AFM	P43652	599 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	CDH8	P55286	799 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	ENPEP	Q07075	957 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	LMAN2	Q12907	356 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	STK4	Q13043	487 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	BTBD8	Q5XKL5	378 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	PSAPL1	Q6NUJ1	521 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	LPCAT2	Q7L5N7	544 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	SFTPA1	Q8IWL2	248 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	ZMIZ2	Q8NF64	920 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	TMC2	Q8TDI7	906 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	MED10	Q9BTT4	135 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	KCTD10	Q9H3F6	313 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	CCSER2	Q9H7U1	834 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	PNPLA8	Q9NP80	782 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	TMEM9B	Q9NQ34	198 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	CYLD	Q9NQC7	956 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	SPHK2	Q9NRA0	654 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	EXOC1	Q9NV70	894 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	GMIP	Q9P107	970 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	USP25	Q9UHP3	1055 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	STARD13	Q9Y3M8	1113 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	SPEG	Q15772	3267 aa		13.75	□□□□□ -0.21
ABCF3-212	ENST00000478288	FREM2	Q5SZK8	3169 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	ANTXRL	A6NF34	631 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	C4orf47	A7E2U8	309 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	ACTN4	O43707	911 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	TLR5	O60602	858 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	TULP3	O75386	442 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	TIE1	P35590	1138 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	INCA1	Q0VD86	236 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	MAP7D1	Q3KQU3	841 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	KLHDC10	Q6PID8	442 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	SCARA5	Q6ZMJ2	495 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	HTR3D	Q70Z44	454 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	BBS7	Q8IWZ6	715 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	TERB1	Q8NA31	727 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	CHAMP1	Q96JM3	812 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	SMO	Q99835	787 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	SDCBP2	Q9H190	292 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	TLR8	Q9NR97	1041 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	MARK1	Q9P0L2	795 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	DEC1	Q9P2X7	70 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	RCOR1	Q9UKL0	485 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	SCML2	Q9UQR0	700 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	CACNA1G	O43497	2377 aa		13.74	□□□□□ -0.21
ABCF3-212	ENST00000478288	DSP	P15924	2871 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	TBC1D3B	A6NDS4	549 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	CDX4	O14627	284 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	SCAMP3	O14828	347 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	GREM1	O60565	184 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	NR3C1	P04150	777 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	FAM200B	P0CF97	657 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	CEACAM1	P13688	526 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	ASPA	P45381	313 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	DHPS	P49366	369 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	NOVA1	P51513	510 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	NDST1	P52848	882 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	KDSR	Q06136	332 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	GOLGA8F	Q08AF8	430 aa		13.73	□□□□□ -0.21
ABCF3-212	ENST00000478288	GOLGA8DP	Q0D2H9	430 aa		13.73	□□□□□ -0.21

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