RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 AGAP1Q9UPQ3 857 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 APOBEC2Q9Y235 224 aaKnown RBP1.98□□□□□ -2.09
CALD1-218ENST00000478075 PRSS29PA6NIE9 313 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 F2RL2O00254 374 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 FGAP02671 866 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 ATXN1LP0C7T5 689 aaKnown RBP1.97□□□□□ -2.09
CALD1-218ENST00000478075 OSMP13725 252 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 SCAND1P57086 179 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 ROR2Q01974 943 aaKnown RBP1.97□□□□□ -2.09
CALD1-218ENST00000478075 FAPQ12884 760 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 BOP1Q14137 746 aaKnown RBP1.97□□□□□ -2.09
CALD1-218ENST00000478075 E2F2Q14209 437 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 KIF22Q14807 665 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 SEC23BQ15437 767 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 C21orf62-AS1Q17RA5 79 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 ARHGAP40Q5TG30 622 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 LAYNQ6UX15 382 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 FAM83HQ6ZRV2 1179 aaPredicted RBP1.97□□□□□ -2.09
CALD1-218ENST00000478075 CREB3L2Q70SY1 520 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 SIRT6Q8N6T7 355 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 DNAJC5GQ8N7S2 189 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 HDAC10Q969S8 669 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 SDF2L1Q9HCN8 221 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 THSD1Q9NS62 852 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 CCM2LQ9NUG4 571 aaPredicted RBP1.97□□□□□ -2.09
CALD1-218ENST00000478075 GAR1Q9NY12 217 aaKnown RBP1.97□□□□□ -2.09
CALD1-218ENST00000478075 CDK11AQ9UQ88 783 aaPredicted RBP1.97□□□□□ -2.09
CALD1-218ENST00000478075 GAB2Q9UQC2 676 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 PCDHA13Q9Y5I0 950 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 GPR45Q9Y5Y3 372 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
CALD1-218ENST00000478075 ZG16O60844 167 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 PPP1R3DO95685 299 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 SNRNP70P08621 437 aaKnown RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 SEC61A1P61619 476 aaKnown RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 LMO4P61968 165 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 KIF5AQ12840 1032 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 CYP1B1Q16678 543 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 FAM110CQ1W6H9 321 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 AASDHQ4L235 1098 aaPredicted RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 CC2D1BQ5T0F9 858 aaKnown RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 FAM160B1Q5W0V3 765 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 PPP4R3AQ6IN85 833 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 H1FNTQ75WM6 255 aaPredicted RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 USP37Q86T82 979 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 SKAP1Q86WV1 359 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 DHX37Q8IY37 1157 aaKnown RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 LEO1Q8WVC0 666 aaPredicted RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 RSPRY1Q96DX4 576 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 RTP4Q96DX8 246 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 FBXO17Q96EF6 278 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 MFSD3Q96ES6 412 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 CLPTM1LQ96KA5 538 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 UHRF2Q96PU4 802 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 DMRTA2Q96SC8 542 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 TTC1Q99614 292 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 OSBPL2Q9H1P3 480 aa1.96□□□□□ -2.1
CALD1-218ENST00000478075 ZNF277Q9NRM2 450 aaPredicted RBP1.96□□□□□ -2.1
CALD1-218ENST00000478075 NT5C1B-RDH14C9J2C7 533 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 AP4M1O00189 453 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 PRSS2P07478 247 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 AGXTP21549 392 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 ID4P47928 161 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 PXNP49023 591 aaPredicted RBP1.95□□□□□ -2.1
CALD1-218ENST00000478075 PDE6CP51160 858 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 TRAF2Q12933 501 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 SPINK14Q6IE38 97 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 DCDC5Q6ZRR9 648 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 C16orf86Q6ZW13 317 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 LINC01465Q8N7H1 131 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 PMFBP1Q8TBY8 1022 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 SLC46A1Q96NT5 459 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 PRR25Q96S07 402 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 HERPUD2Q9BSE4 406 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 PIF1Q9H611 641 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 MSRB1Q9NZV6 116 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 HESX1Q9UBX0 185 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 NDRG4Q9ULP0 352 aaKnown RBP1.95□□□□□ -2.1
CALD1-218ENST00000478075 PLAAQ9Y263 795 aa1.95□□□□□ -2.1
CALD1-218ENST00000478075 CLEC18AA5D8T8 446 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 M0QYG6 137 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 DCLK1O15075 740 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 INPPL1O15357 1258 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 PRPF4O43172 522 aaKnown RBP eCLIP1.94□□□□□ -2.1
CALD1-218ENST00000478075 RPLP2P05387 115 aaKnown RBP1.94□□□□□ -2.1
CALD1-218ENST00000478075 FTH1P19P0C7X4 201 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 FCGR1AP12314 374 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 MALP21145 153 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 PIK3CGP48736 1102 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 SLC12A2P55011 1212 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 SUMO2P61956 95 aaKnown RBP1.94□□□□□ -2.1
CALD1-218ENST00000478075 PSG6Q00889 435 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 DSC1Q08554 894 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 BFSP2Q13515 415 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 LONRF3Q496Y0 759 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 AWAT1Q58HT5 328 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 EARS2Q5JPH6 523 aaKnown RBP1.94□□□□□ -2.1
CALD1-218ENST00000478075 RGS7BPQ6MZT1 257 aaPredicted RBP1.94□□□□□ -2.1
CALD1-218ENST00000478075 SLC4A10Q6U841 1118 aa1.94□□□□□ -2.1
CALD1-218ENST00000478075 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms