RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CPLX2Q6PUV4 134 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 KIAA1324Q6UXG2 1013 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 C1orf186Q6ZWK4 172 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 PRICKLE2Q7Z3G6 844 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TMEM25Q86YD3 366 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 CD302Q8IX05 232 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 ZNF248Q8NDW4 579 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TSC1Q92574 1164 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 OTUB2Q96DC9 234 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 ZFRQ96KR1 1074 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 LGMNQ99538 433 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TRIM4Q9C037 500 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 MKRN2Q9H000 416 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 RPF1Q9H9Y2 349 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 OSGEPQ9NPF4 335 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 TRPM5Q9NZQ8 1165 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 KIAA1024Q9UPX6 916 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 DERAQ9Y315 318 aa7.84□□□□□ -1.15
SPTLC1-205ENST00000477888 KNL1Q8NG31 2342 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 CBX4O00257 560 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 GFRA2O00451 464 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 ENC1O14682 589 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 OGTO15294 1046 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 DTNBO60941 627 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 ACAT1P24752 427 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 OXTRP30559 389 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 KRT2P35908 639 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 GRIK1P39086 918 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 CTSKP43235 329 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 MATR3P43243 847 aaKnown RBP eCLIP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 MAGEA11P43364 429 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 PPP3CCP48454 512 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 ACADVLP49748 655 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 STK3Q13188 491 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 TMEM132DQ14C87 1099 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 FUT11Q495W5 492 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 BTBD8Q5XKL5 378 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 RINT1Q6NUQ1 792 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 FAM171BQ6P995 826 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 ZNF574Q6ZN55 896 aaPredicted RBP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 PDCL2Q8N4E4 241 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 RFFLQ8WZ73 363 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 KCNN1Q92952 543 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 NAF1Q96HR8 494 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 FUBP3Q96I24 572 aaKnown RBP eCLIP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 SPATA17Q96L03 361 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 CEP295NLQ96MC4 621 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 DUSP9Q99956 384 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 NUP58Q9BVL2 599 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 TTLL2Q9BWV7 592 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 SPHK2Q9NRA0 654 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 DDX43Q9NXZ2 648 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 DPP3Q9NY33 737 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 KCNG1Q9UIX4 513 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 CPSF3Q9UKF6 684 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 C2CD2Q9Y426 696 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 PCDHB6Q9Y5E3 794 aa7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 SPTAN1Q13813 2472 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-205ENST00000477888 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 A0A0B4J269 797 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 A0A1B0GTQ1 180 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 E9PMD0 336 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 LDOC1O95751 146 aaPredicted RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 PLS3P13797 630 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 PSMA5P28066 241 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 MCM7P33993 719 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 CCT6AP40227 531 aaKnown RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 GRIA4P48058 902 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 IL9RQ01113 521 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 VAC14Q08AM6 782 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 TEAD4Q15561 434 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 ANO4Q32M45 955 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 BROXQ5VW32 411 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 HAUS3Q68CZ6 603 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 GRAMD4Q6IC98 578 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 DENND5BQ6ZUT9 1274 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 RUFY3Q7L099 469 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 DDX42Q86XP3 938 aaKnown RBP eCLIP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 TMPRSS6Q8IU80 811 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 SPATA2LQ8IUW3 424 aaPredicted RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 SCN4BQ8IWT1 228 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 DCBLD1Q8N8Z6 715 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 CNDP2Q96KP4 475 aaKnown RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 ZNF578Q96N58 590 aaPredicted RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 PCED1AQ9H1Q7 454 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 ASB7Q9H672 318 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 ZSWIM6Q9HCJ5 1215 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 TM9SF3Q9HD45 589 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 DDX19AQ9NUU7 478 aaKnown RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 LRWD1Q9UFC0 647 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 L1RE1Q9UN81 338 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 RELNP78509 3460 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 BOD1L1Q8NFC6 3051 aa7.82□□□□□ -1.16
SPTLC1-205ENST00000477888 GABRDO14764 452 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 HCRTO43612 131 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 CACNG3O60359 315 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 DFNA5O60443 496 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 CDKL5O76039 1030 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms