RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 NPEPPSP55786 919 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 NUP107P57740 925 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 IL9RQ01113 521 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 DSG1Q02413 1049 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 DHX34Q14147 1143 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 NAB2Q15742 525 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 UAP1Q16222 522 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 CNGA2Q16280 664 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 CWF19L2Q2TBE0 894 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 SLC45A4Q5BKX6 768 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 KLHDC7AQ5VTJ3 777 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 IL23RQ5VWK5 629 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 KRT40Q6A162 431 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 TMEM53Q6P2H8 277 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 DHRS4L2Q6PKH6 230 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PACS1Q6VY07 963 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 Q6ZNX1 250 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 FRA10AC1Q70Z53 315 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 TRMT10CQ7L0Y3 403 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 NANOGNBQ7Z5D8 188 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 ZC3H18Q86VM9 953 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 NOSTRINQ8IVI9 506 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 RIBC1Q8N443 379 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 CSGALNACT2Q8N6G5 542 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 ENAHQ8N8S7 591 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 KBTBD3Q8NAB2 608 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 NCOA7Q8NI08 942 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 SKA1Q96BD8 255 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 ANKRD36BP1Q96IX9 119 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 RHOVQ96L33 236 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 C8orf49Q96NF6 230 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 BTBD9Q96Q07 612 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 MED15Q96RN5 788 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 KRT12Q99456 494 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 FMO2Q99518 471 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 HAUS7Q99871 368 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 DDX23Q9BUQ8 820 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 C1QTNF3Q9BXJ4 246 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 TXLNGYQ9BZA5 131 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 ZMYND12Q9H0C1 365 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 VPS16Q9H269 839 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 CUEDC2Q9H467 287 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 CLK4Q9HAZ1 481 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 UBN1Q9NPG3 1134 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 NLRC4Q9NPP4 1024 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 GPR108Q9NPR9 543 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 ABCF3Q9NUQ8 709 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 EHD2Q9NZN4 543 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 UVRAGQ9P2Y5 699 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 FBXL5Q9UKA1 691 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 CHMP2BQ9UQN3 213 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 DMTF1Q9Y222 760 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 EFR3BQ9Y2G0 817 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 FAM32AQ9Y421 112 aaKnown RBP4.96□□□□□ -1.62
PTCD3-212ENST00000477520 NUMBLQ9Y6R0 609 aa4.96□□□□□ -1.62
PTCD3-212ENST00000477520 SPEF2Q9C093 1822 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 NID2Q14112 1375 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 A0A0A6YYK5 440 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 A0A0U1RQJ8 604 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 CENPBD1B2RD01 187 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF701M0R085 212 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 POLRMTO00411 1230 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 HGSO14964 777 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 HNRNPRO43390 633 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RAD51CO43502 376 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TIMM44O43615 452 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 MAGEC1O60732 1142 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 STAM2O75886 525 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 PDE5AO76074 875 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 ZBTB7AO95365 584 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 NTSR2O95665 410 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 GNA14O95837 355 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SLPIP03973 132 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RAG1P15918 1043 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SERPINB3P29508 390 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 BMP8BP34820 402 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 HALP42357 657 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 MATR3P43243 847 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TRAPPC10P48553 1259 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TUBP50607 506 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 KIF11P52732 1056 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 HMGA2P52926 109 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 AP2B1P63010 937 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 GUCY1B3Q02153 619 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 EIF2B5Q13144 721 aaKnown RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 MED21Q13503 144 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 GIT2Q14161 759 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 KIF22Q14807 665 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RPS6KA1Q15418 735 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 TAF1CQ15572 869 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SLC9C1Q4G0N8 1177 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 SUSD4Q5VX71 490 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 FOXB2Q5VYV0 432 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 RRAGBQ5VZM2 374 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 FAM91A1Q658Y4 838 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 KIAA1841Q6NSI8 718 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 C1orf228Q6PIY5 440 aa4.95□□□□□ -1.62
PTCD3-212ENST00000477520 C4orf50Q6ZRC1 276 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms