RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 DNAAF3Q8N9W5 541 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 GPR156Q8NFN8 814 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 OR8K3Q8NH51 312 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 USP13Q92995 863 aaPredicted RBP6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 ATG4CQ96DT6 458 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 ANKRD36BP1Q96IX9 119 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 VPS35Q96QK1 796 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 STRA6Q9BX79 667 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 MOV10L1Q9BXT6 1211 aaKnown RBP6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 CARD9Q9H257 536 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 RIMS4Q9H426 269 aaPredicted RBP6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 GOLPH3LQ9H4A5 285 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 C1orf112Q9NSG2 853 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 CTNNAL1Q9UBT7 734 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 CYB5R1Q9UHQ9 305 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 TINAGQ9UJW2 476 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 NOD1Q9Y239 953 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 LRRC42Q9Y546 428 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 GPC6Q9Y625 555 aaPredicted RBP6.22□□□□□ -1.41
SPTLC3-205ENST00000476791 DDX39AO00148 427 aaKnown RBP6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 HIP1O00291 1037 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 NDUFA2O43678 99 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 TSPAN3O60637 253 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 SLU7O95391 586 aaKnown RBP6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 CHRNA1P02708 482 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 LRG1P02750 347 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 ASNSP08243 561 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 PTPN2P17706 415 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 CTNNA2P26232 953 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 G0S2P27469 103 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 CRABP2P29373 138 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 HOXD13P35453 343 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 DPYDQ12882 1025 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 ADAM15Q13444 863 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 PPP2R5EQ16537 467 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 SKIDA1Q1XH10 827 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 C4orf17Q53FE4 359 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 DUPD1Q68J44 220 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 IQSEC1Q6DN90 963 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 ADGRG6Q86SQ4 1221 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 CNTROBQ8N137 903 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 FBXL16Q8N461 479 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 FAM216AQ8WUB2 273 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 ERO1AQ96HE7 468 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 NUP58Q9BVL2 599 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 CFHR5Q9BXR6 569 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 TTYH3Q9C0H2 523 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 SP110Q9HB58 689 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 GPAMQ9HCL2 828 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 MAN1C1Q9NR34 630 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 ASH2LQ9UBL3 628 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 ADD3Q9UEY8 706 aaKnown RBP6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 DERAQ9Y315 318 aa6.21□□□□□ -1.41
SPTLC3-205ENST00000476791 CNTLNQ9NXG0 1405 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 KANSL1LA0AUZ9 987 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 TMEM229AB2RXF0 380 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 H7BY64 318 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 GPR25O00155 361 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 FPGTO14772 594 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 LDLRAD4O15165 306 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 DDX3YO15523 660 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CBR3O75828 277 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CIAO1O76071 339 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 SEMA3DO95025 777 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CCNDBP1O95273 360 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 ITGB3P05106 788 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CHRM3P20309 590 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CTNNB1P35222 781 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 KRT9P35527 623 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 ARCN1P48444 511 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 MXRA7P84157 204 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 OCRLQ01968 901 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 TRIM25Q14258 630 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 PTPAQ15257 358 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 WDR93Q6P2C0 686 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 MTFR2Q6P444 385 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 C4orf22Q6V702 233 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CPLX4Q7Z7G2 160 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 PSTKQ8IV42 348 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 TTLL6Q8N841 843 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CEP112Q8N8E3 955 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 FAM133AQ8N9E0 248 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 SNX31Q8N9S9 440 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 SPATA4Q8NEY3 305 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 PPP1R35Q8TAP8 253 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF668Q96K58 619 aaPredicted RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF570Q96NI8 536 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 FCRL4Q96PJ5 515 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 MRPL1Q9BYD6 325 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF341Q9BYN7 854 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 ANKRD2Q9GZV1 360 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 CENPHQ9H3R5 247 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 EPB41L5Q9HCM4 733 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 VTA1Q9NP79 307 aa6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 PIH1D3Q9NQM4 214 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-205ENST00000476791 TLR7Q9NYK1 1049 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms