RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NSFP46459 744 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 ARSEP51690 589 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 NEK3P51956 506 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 RPS6P62753 249 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 NKX3-2P78367 333 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 SMAD3P84022 425 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 OCRLQ01968 901 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 OGDHQ02218 1023 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 RNASELQ05823 741 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 MYO1EQ12965 1108 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 DMP1Q13316 513 aaPredicted RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 PPIGQ13427 754 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBR4-212ENST00000475973 BAATQ14032 418 aaPredicted RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 FSCN1Q16658 493 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 P3H1Q32P28 736 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 EML3Q32P44 896 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 C4orf48Q5BLP8 95 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 XKR9Q5GH70 373 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 LIN9Q5TKA1 542 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 IQSEC1Q6DN90 963 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 FAM109BQ6ICB4 259 aaPredicted RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 LLGL2Q6P1M3 1020 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 MFSD7Q6UXD7 560 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 C4orf50Q6ZRC1 276 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 Q7L0L9 218 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 OTUD6AQ7L8S5 288 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 EEPD1Q7L9B9 569 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 OTOAQ7RTW8 1153 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 PCGF5Q86SE9 256 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 SRRM1Q8IYB3 904 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 ARFGAP1Q8N6T3 406 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 CMASQ8NFW8 434 aaPredicted RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 DCAKDQ8WVC6 231 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 FOXJ1Q92949 421 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 SKA1Q96BD8 255 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 TRIM43Q96BQ3 446 aaPredicted RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 RTP4Q96DX8 246 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 SAAL1Q96ER3 474 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 NAF1Q96HR8 494 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 C9orf72Q96LT7 481 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 TBC1D10AQ9BXI6 508 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 MAK16Q9BXY0 300 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 LHX5Q9H2C1 402 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 MTIF3Q9H2K0 278 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 TRABDQ9H4I3 376 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 NKX1-2Q9UD57 310 aaPredicted RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 TRIM33Q9UPN9 1127 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 FCF1Q9Y324 198 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 Q9Y3F1 56 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 PPME1Q9Y570 386 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 ASB3Q9Y575 518 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 NUB1Q9Y5A7 615 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 TMEM265A0A087WTH1 108 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 TMEM150BA6NC51 233 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 SMIM23A6NLE4 172 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 DYNC1LI2O43237 492 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 ADCY6O43306 1168 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 DIAPH2O60879 1101 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 ATP2C2O75185 946 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 LUC7L3O95232 432 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 LMNAP02545 664 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 EDN1P05305 212 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CALB1P05937 261 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 LINGO3P0C6S8 592 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 ATP6V1C1P21283 382 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 RPA3P35244 121 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 CCNFP41002 786 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 NAMPTP43490 491 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 GABRB2P47870 512 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CPT1AP50416 773 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 RAP1GDS1P52306 607 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 NLRP11P59045 1033 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 SLC25A11Q02978 314 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 FAAP100Q0VG06 881 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 SNX1Q13596 522 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 PIGHQ14442 188 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 FASTKD3Q14CZ7 662 aaKnown RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 ACAP1Q15027 740 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 PRKD1Q15139 912 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 SHHQ15465 462 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 DBN1Q16643 649 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 HSF5Q4G112 596 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 XKR3Q5GH77 459 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 C9orf50Q5SZB4 431 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 SLFN12LQ6IEE8 588 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CCSAPQ6IQ19 270 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 ANO7Q6IWH7 933 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 PSRC1Q6PGN9 363 aaPredicted RBP7.17□□□□□ -1.26
UBR4-212ENST00000475973 ZPBP2Q6X784 338 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 ZNF365Q70YC5 407 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CYS1Q717R9 158 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CLNKQ7Z7G1 428 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 CCDC25Q86WR0 208 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 BRSK2Q8IWQ3 736 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 FAM126BQ8IXS8 530 aa7.17□□□□□ -1.26
UBR4-212ENST00000475973 TMEM199Q8N511 208 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms