RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 TULP3O75386 442 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 CHRM1P11229 460 aaPredicted RBP14.85□□□□□ -0.03
CCDC78-209ENST00000474647 HOXB2P14652 356 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 SYT1P21579 422 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 MYL6P60660 151 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 SIM1P81133 766 aaPredicted RBP14.85□□□□□ -0.03
CCDC78-209ENST00000474647 PSMD6Q15008 389 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 SLC39A14Q15043 492 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 STK38Q15208 465 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 HECTD3Q5T447 861 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 SLC23A3Q6PIS1 610 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 TRMT11Q7Z4G4 463 aaKnown RBP14.85□□□□□ -0.03
CCDC78-209ENST00000474647 FAM35AQ86V20 835 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 BBS7Q8IWZ6 715 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 PHTF2Q8N3S3 785 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 HDDC3Q8N4P3 179 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 SCAMP5Q8TAC9 235 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 OVCA2Q8WZ82 227 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 ZFRQ96KR1 1074 aaKnown RBP14.85□□□□□ -0.03
CCDC78-209ENST00000474647 KCNK16Q96T55 309 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 LRRC27Q9C0I9 530 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 SMYD3Q9H7B4 428 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 AGPAT3Q9NRZ7 376 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 CALCOCO1Q9P1Z2 691 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 DEC1Q9P2X7 70 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 CHORDC1Q9UHD1 332 aaPredicted RBP14.85□□□□□ -0.03
CCDC78-209ENST00000474647 PILRBQ9UKJ0 227 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 ITPR1Q14643 2758 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 CKAP5Q14008 2032 aa14.85□□□□□ -0.03
CCDC78-209ENST00000474647 ATRXP46100 2492 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 A0A0A0MRY4 1105 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 GABRG2P18507 467 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 SLC5A3P53794 718 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 GFPT1Q06210 699 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-209ENST00000474647 BIRC3Q13489 604 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 CUL4AQ13619 759 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 DUOXA1Q1HG43 343 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 PREPLQ4J6C6 727 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-209ENST00000474647 FAM26FQ5R3K3 315 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 NUDT18Q6ZVK8 323 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 TERB1Q8NA31 727 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 XXYLT1Q8NBI6 393 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 SYAP1Q96A49 352 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-209ENST00000474647 DHX58Q96C10 678 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 OTUB2Q96DC9 234 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 SMARCD1Q96GM5 515 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 TRIM9Q9C026 710 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 SPHK2Q9NRA0 654 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 KRT82Q9NSB4 513 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 GMIPQ9P107 970 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 KLK13Q9UKR3 277 aa14.84□□□□□ -0.03
CCDC78-209ENST00000474647 ANKRD11Q6UB99 2663 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-209ENST00000474647 SRRM3A6NNA2 597 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-209ENST00000474647 TRIM24O15164 1050 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 HOXC11O43248 304 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-209ENST00000474647 TGFB1I1O43294 461 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 OPHN1O60890 802 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 CASP4P49662 377 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 CDH8P55286 799 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 COL9A2Q14055 689 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-209ENST00000474647 ZNF699Q32M78 642 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 SPDYCQ5MJ68 293 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 PEAR1Q5VY43 1037 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-209ENST00000474647 GRAMD4Q6IC98 578 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 SLC36A4Q6YBV0 504 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 EPM2AIP1Q7L775 607 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-209ENST00000474647 TMEM25Q86YD3 366 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 ETFBKMTQ8IXQ9 262 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 CEP76Q8TAP6 659 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 ZNF507Q8TCN5 953 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 ZNF516Q92618 1163 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 WBP2Q969T9 261 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 ELMO3Q96BJ8 720 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 DMAP1Q9NPF5 467 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-209ENST00000474647 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 DNAJC17Q9NVM6 304 aaKnown RBP14.83□□□□□ -0.04
CCDC78-209ENST00000474647 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 CYP8B1Q9UNU6 501 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 NEUROG3Q9Y4Z2 214 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 UBE4BO95155 1302 aa14.83□□□□□ -0.04
CCDC78-209ENST00000474647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.82□□□□□ -0.04
CCDC78-209ENST00000474647 NEDD8-MDP1E9PL57 170 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 ZBTB24O43167 697 aaPredicted RBP14.82□□□□□ -0.04
CCDC78-209ENST00000474647 AP1G2O75843 785 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 HOXB3P14651 431 aaPredicted RBP14.82□□□□□ -0.04
CCDC78-209ENST00000474647 NTSR1P30989 418 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 ATICP31939 592 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 HOXD12P35452 270 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 AMPD3Q01432 767 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 ZNF33AQ06730 810 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 SEMA3BQ13214 749 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 ORC1Q13415 861 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 E2F4Q16254 413 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 ZNF667Q5HYK9 610 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 EGFLAMQ63HQ2 1017 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 SDE2Q6IQ49 451 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 MIB1Q86YT6 1006 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 CHPFQ8IZ52 775 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 MINDY1Q8N5J2 469 aa14.82□□□□□ -0.04
CCDC78-209ENST00000474647 SPRYD3Q8NCJ5 442 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms