RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SYT15Q9BQS2 421 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 FAM213AQ9BRX8 229 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 STRA6Q9BX79 667 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 MTMR12Q9C0I1 747 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 RNF38Q9H0F5 515 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ZHX3Q9H4I2 956 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ARHGEF4Q9NR80 690 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 SMPD4Q9NXE4 827 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 TRPM5Q9NZQ8 1165 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 CALCOCO1Q9P1Z2 691 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 SIX4Q9UIU6 781 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ITGA11Q9UKX5 1188 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 SNX9Q9Y5X1 595 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 CPQQ9Y646 472 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ADAMTS9Q9P2N4 1935 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 URB1O60287 2271 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 KNL1Q8NG31 2342 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 IGHV1OR15-9A0A0B4J2B8 117 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 A0A1W2PQD8 194 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 A0A1W2PQF6 199 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 F8VP50 259 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC9A3R1O14745 358 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 GPR37O15354 613 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 HOXC11O43248 304 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 SH3BP5O60239 455 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 SYPP08247 313 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 FTH1P19P0C7X4 201 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 HOXB2P14652 356 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 GABRG2P18507 467 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 LMO2P25791 158 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 DDIT3P35638 169 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 GRIK1P39086 918 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 UBA7P41226 1012 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 NOP14P78316 857 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF33AQ06730 810 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC14A1Q13336 389 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 POSTNQ15063 836 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 TRIP6Q15654 476 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 LY6G5CQ5SRR4 150 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 MCTP1Q6DN14 999 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC36A4Q6YBV0 504 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CCNI2Q6ZMN8 369 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF720Q7Z2F6 126 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 TRMT11Q7Z4G4 463 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 SFR1Q86XK3 245 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 MIB1Q86YT6 1006 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 NAXDQ8IW45 347 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 PGBD3Q8N328 593 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CSGALNACT2Q8N6G5 542 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF513Q8N8E2 541 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 PNPLA1Q8N8W4 532 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 TERB1Q8NA31 727 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 MYCBPAPQ8TBZ2 947 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 MDM1Q8TC05 714 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CACTINQ8WUQ7 758 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 LARP4BQ92615 738 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 HVCN1Q96D96 273 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 SAAL1Q96ER3 474 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CALML4Q96GE6 196 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 PCED1BQ96HM7 432 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 ZSCAN31Q96LW9 406 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 HSPA12BQ96MM6 686 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CCDC86Q9H6F5 360 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CD248Q9HCU0 757 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CRTAC1Q9NQ79 661 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 TMEM30AQ9NV96 361 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 RBAKQ9NYW8 714 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CFAP97Q9P2B7 532 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 MAGEC2Q9UBF1 373 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 HCN2Q9UL51 889 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 CDH9Q9ULB4 789 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 MYOFQ9NZM1 2061 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 PTPRJQ12913 1337 aa5.47□□□□□ -1.53
SNRNP40-204ENST00000474025 HECTD1Q9ULT8 2610 aa5.46□□□□□ -1.53
SNRNP40-204ENST00000474025 GOLGA4Q13439 2230 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 E2F8A0AVK6 867 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TBC1D3BA6NDS4 549 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TRIM66O15016 1216 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TRIM24O15164 1050 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 COCHO43405 550 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CBFA2T3O75081 653 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF217O75362 1048 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TULP3O75386 442 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 KRT19P08727 400 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TMEM191BP0C7N4 346 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 NDUFV2P19404 249 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 GARTP22102 1010 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 WARSP23381 471 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 ANXA13P27216 316 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 NTSR1P30989 418 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 SLC19A1P41440 591 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 WASP42768 502 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 PPP3CCP48454 512 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CASP5P51878 434 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CACNA2D1P54289 1103 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 RBP5P82980 135 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 CYP27A1Q02318 531 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 GRIN1Q05586 938 aa5.46□□□□□ -1.54
SNRNP40-204ENST00000474025 TAF10Q12962 218 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms