RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 SV2CQ496J9 727 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 INTS6LQ5JSJ4 861 aaKnown RBP11.25□□□□□ -0.61
SSBP1-209ENST00000473783 FBXL19Q6PCT2 694 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 ZNF574Q6ZN55 896 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-209ENST00000473783 NAT16Q8N8M0 369 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
SSBP1-209ENST00000473783 TMEM161BQ8NDZ6 487 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 PKMYT1Q99640 499 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 TRIM4Q9C037 500 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 RNF38Q9H0F5 515 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 OSGEPQ9NPF4 335 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 ANKRD6Q9Y2G4 727 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 NBASA2RRP1 2371 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 BOD1L1Q8NFC6 3051 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 ZNF840PA6NDX5 716 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 KPNA7A9QM74 516 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 LAD1O00515 517 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 TRIM66O15016 1216 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 OAS1P00973 400 aaKnown RBP11.24□□□□□ -0.61
SSBP1-209ENST00000473783 IGLV3-19P01714 112 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 MAPTP10636 758 aaKnown RBP11.24□□□□□ -0.61
SSBP1-209ENST00000473783 CCT6AP40227 531 aaKnown RBP11.24□□□□□ -0.61
SSBP1-209ENST00000473783 MAGEA11P43364 429 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 SMTNP53814 917 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 VAC14Q08AM6 782 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 STARD3Q14849 445 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 ECM1Q16610 540 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 SPATA2LQ8IUW3 424 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-209ENST00000473783 SCN4BQ8IWT1 228 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 ERLEC1Q96DZ1 483 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
SSBP1-209ENST00000473783 SPATA17Q96L03 361 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 DUSP9Q99956 384 aaKnown RBP11.24□□□□□ -0.61
SSBP1-209ENST00000473783 TIPINQ9BVW5 301 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 RAD54BQ9Y620 910 aa11.24□□□□□ -0.61
SSBP1-209ENST00000473783 KCNJ18B7U540 433 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 H0Y8X5 98 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 LDOC1O95751 146 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-209ENST00000473783 CDC25AP30304 524 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 ACADVLP49748 655 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 TPMTP51580 245 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 ZNF132P52740 706 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 MYL7Q01449 175 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 STK3Q13188 491 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 ORC1Q13415 861 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 FUT11Q495W5 492 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 SCFD1Q8WVM8 642 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 BICD1Q96G01 975 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 NAF1Q96HR8 494 aaKnown RBP11.23□□□□□ -0.61
SSBP1-209ENST00000473783 HIC2Q96JB3 615 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
SSBP1-209ENST00000473783 ZNF560Q96MR9 790 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 ZNF578Q96N58 590 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-209ENST00000473783 NUP58Q9BVL2 599 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 TTLL2Q9BWV7 592 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 MKRN2Q9H000 416 aaKnown RBP11.23□□□□□ -0.61
SSBP1-209ENST00000473783 ASB7Q9H672 318 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 SPHK2Q9NRA0 654 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 DDX19AQ9NUU7 478 aaKnown RBP11.23□□□□□ -0.61
SSBP1-209ENST00000473783 DDX43Q9NXZ2 648 aaKnown RBP11.23□□□□□ -0.61
SSBP1-209ENST00000473783 GTF3C4Q9UKN8 822 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 KIAA1024Q9UPX6 916 aa11.23□□□□□ -0.61
SSBP1-209ENST00000473783 H0YCG3 227 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 TRIM24O15164 1050 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 MBL2P11226 248 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-209ENST00000473783 PLS3P13797 630 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 GLDCP23378 1020 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 MCM7P33993 719 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 GRIK1P39086 918 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 PNPLA4P41247 253 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 LIG4P49917 911 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 DNAJC3Q13217 504 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 ILKQ13418 452 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 ANO4Q32M45 955 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 C2CD3Q4AC94 2353 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 VSTM1Q6UX27 236 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 DENND5BQ6ZUT9 1274 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 DHX40Q8IX18 779 aaKnown RBP11.22□□□□□ -0.61
SSBP1-209ENST00000473783 TMEM86AQ8N2M4 240 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 PDCL2Q8N4E4 241 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 SNX19Q92543 992 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 WASF1Q92558 559 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 RUSC1Q9BVN2 902 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 DNAJC17Q9NVM6 304 aaKnown RBP11.22□□□□□ -0.61
SSBP1-209ENST00000473783 DPP3Q9NY33 737 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 CPSF3Q9UKF6 684 aaKnown RBP11.22□□□□□ -0.61
SSBP1-209ENST00000473783 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
SSBP1-209ENST00000473783 A0A1B0GTQ1 180 aa11.21□□□□□ -0.61
SSBP1-209ENST00000473783 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
SSBP1-209ENST00000473783 PRRT4C9JH25 899 aa11.21□□□□□ -0.61
SSBP1-209ENST00000473783 KCNK3O14649 394 aa11.21□□□□□ -0.61
SSBP1-209ENST00000473783 HNRNPDLO14979 420 aaKnown RBP11.21□□□□□ -0.61
SSBP1-209ENST00000473783 CACNG3O60359 315 aa11.21□□□□□ -0.61
SSBP1-209ENST00000473783 OR52Z1P0C646 297 aa11.21□□□□□ -0.61
SSBP1-209ENST00000473783 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms