RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PHTF2Q8N3S3 785 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 GABRG3Q99928 467 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 NUP58Q9BVL2 599 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 DPH1Q9BZG8 443 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 PCED1AQ9H1Q7 454 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 BHMT2Q9H2M3 363 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 KCNG1Q9UIX4 513 aa10.96□□□□□ -0.65
CDHR3-209ENST00000472116 H0Y8X5 98 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 GFRA2O00451 464 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 PIRO00625 290 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 KCNK3O14649 394 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 SNPHO15079 494 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 SLC16A4O15374 487 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 HOXC11O43248 304 aaPredicted RBP10.95□□□□□ -0.66
CDHR3-209ENST00000472116 AFPP02771 609 aaKnown RBP10.95□□□□□ -0.66
CDHR3-209ENST00000472116 ITGAVP06756 1048 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 MBL2P11226 248 aaPredicted RBP10.95□□□□□ -0.66
CDHR3-209ENST00000472116 MYF5P13349 255 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 MUTP22033 750 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 ANXA13P27216 316 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 PPP3CCP48454 512 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 SMTNP53814 917 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 C21orf59P57076 290 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 MCL1Q07820 350 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 DNAJC3Q13217 504 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 ILKQ13418 452 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 TMEM132DQ14C87 1099 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 SV2CQ496J9 727 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 TAS1R3Q7RTX0 852 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 MIB1Q86YT6 1006 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 ETFBKMTQ8IXQ9 262 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
CDHR3-209ENST00000472116 XPO6Q96QU8 1125 aaKnown RBP10.95□□□□□ -0.66
CDHR3-209ENST00000472116 ACOX2Q99424 681 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 ARHGAP9Q9BRR9 750 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 C17orf75Q9HAS0 396 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 ITM2CQ9NQX7 267 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 TMLHEQ9NVH6 421 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
CDHR3-209ENST00000472116 USP36Q9P275 1121 aaKnown RBP10.95□□□□□ -0.66
CDHR3-209ENST00000472116 SH3BP1Q9Y3L3 701 aa10.95□□□□□ -0.66
CDHR3-209ENST00000472116 CACNA1DQ01668 2161 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 ANKRD17O75179 2603 aaKnown RBP10.94□□□□□ -0.66
CDHR3-209ENST00000472116 CKAP5Q14008 2032 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 ABCA12Q86UK0 2595 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 ANO9A1A5B4 782 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 PAPSS1O43252 624 aaPredicted RBP10.94□□□□□ -0.66
CDHR3-209ENST00000472116 CDKL5O76039 1030 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 KRT2P35908 639 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 ACADVLP49748 655 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 TPMTP51580 245 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 ZXDBP98169 803 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 PDIA5Q14554 519 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 KIAA1614Q5VZ46 1190 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 JADE1Q6IE81 842 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 CACTIN-AS1Q8N1I8 211 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 FBXL16Q8N461 479 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 SNRNP27Q8WVK2 155 aaKnown RBP10.94□□□□□ -0.66
CDHR3-209ENST00000472116 TSC1Q92574 1164 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 SKA1Q96BD8 255 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 SIPA1Q96FS4 1042 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 ZNF560Q96MR9 790 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
CDHR3-209ENST00000472116 SRPK3Q9UPE1 567 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 C2CD3Q4AC94 2353 aa10.94□□□□□ -0.66
CDHR3-209ENST00000472116 KPNA7A9QM74 516 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 YKT6O15498 198 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 SYNCRIPO60506 623 aaKnown RBP10.93□□□□□ -0.66
CDHR3-209ENST00000472116 HIP1RO75146 1068 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 RPS6KB1P23443 525 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 GRIK1P39086 918 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 CCR10P46092 362 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 LIG4P49917 911 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 ZNF132P52740 706 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 CFAP221Q4G0U5 840 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 SGO2Q562F6 1265 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 INTS6LQ5JSJ4 861 aaKnown RBP10.93□□□□□ -0.66
CDHR3-209ENST00000472116 KDM7AQ6ZMT4 941 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 C4orf50Q6ZRC1 276 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 DENND5BQ6ZUT9 1274 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 GATAD2AQ86YP4 633 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 CCDC97Q96F63 343 aaPredicted RBP10.93□□□□□ -0.66
CDHR3-209ENST00000472116 FUBP3Q96I24 572 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDHR3-209ENST00000472116 ACBD6Q9BR61 282 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 ACE2Q9BYF1 805 aaPredicted RBP10.93□□□□□ -0.66
CDHR3-209ENST00000472116 AGXT2Q9BYV1 514 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 CD248Q9HCU0 757 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 TM9SF3Q9HD45 589 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 OSGEPQ9NPF4 335 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 SPHK2Q9NRA0 654 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 THSD1Q9NS62 852 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 DDX43Q9NXZ2 648 aaKnown RBP10.93□□□□□ -0.66
CDHR3-209ENST00000472116 DERAQ9Y315 318 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 ARID1BQ8NFD5 2236 aaPredicted RBP10.93□□□□□ -0.66
CDHR3-209ENST00000472116 PLXNA2O75051 1894 aa10.93□□□□□ -0.66
CDHR3-209ENST00000472116 A0A1B0GTQ1 180 aa10.92□□□□□ -0.66
CDHR3-209ENST00000472116 CBX4O00257 560 aa10.92□□□□□ -0.66
CDHR3-209ENST00000472116 TRIM66O15016 1216 aa10.92□□□□□ -0.66
CDHR3-209ENST00000472116 OGTO15294 1046 aa10.92□□□□□ -0.66
CDHR3-209ENST00000472116 HUS1O60921 280 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms