RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PTPN7P35236 360 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 PCK1P35558 622 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 PEX5P50542 639 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 BCAR1P56945 870 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 RWDD2BP57060 319 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 COPS2P61201 443 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 TSPY1Q01534 308 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 TDGQ13569 410 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 GOLGA7BQ2TAP0 167 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 SCARA3Q6AZY7 606 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 DCUN1D2Q6PH85 259 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 DSTYKQ6XUX3 929 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 CCDC149Q6ZUS6 474 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 BEND5Q7L4P6 421 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 SLC26A9Q7LBE3 791 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 MTERF4Q7Z6M4 381 aaKnown RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 ACOT1Q86TX2 421 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 XYLT1Q86Y38 959 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 RHOT1Q8IXI2 618 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 COLGALT2Q8IYK4 626 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 KATNAL2Q8IYT4 538 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 VPS52Q8N1B4 723 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 RNF169Q8NCN4 708 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 MYCBPAPQ8TBZ2 947 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.61□□□□□ -0.873e-6■■■■■ 27.7
PTPRE-207ENST00000471218 LPPQ93052 612 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 FUBP3Q96I24 572 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 FAM193BQ96PV7 902 aaPredicted RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 CNPY3Q9BT09 278 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 COLEC11Q9BWP8 271 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 DUSP16Q9BY84 665 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 RHOBTB2Q9BYZ6 727 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 CXCL16Q9H2A7 254 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 POMKQ9H5K3 350 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 SLITRK6Q9H5Y7 841 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 SFXN1Q9H9B4 322 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 PRDM16Q9HAZ2 1276 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 HOMER3Q9NSC5 361 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 RNF19AQ9NV58 838 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 TBC1D13Q9NVG8 400 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 ARGLU1Q9NWB6 273 aaPredicted RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 DDX56Q9NY93 547 aaKnown RBP9.61□□□□□ -0.87
PTPRE-207ENST00000471218 RRN3Q9NYV6 651 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 TMEM59LQ9UK28 342 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 EFR3BQ9Y2G0 817 aa9.61□□□□□ -0.87
PTPRE-207ENST00000471218 ATG2AQ2TAZ0 1938 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 SF3B1O75533 1304 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 OR6C75A6NL08 312 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 MEIS3P2A8K0S8 358 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 C2CD4DB7Z1M9 353 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 KRT7P08729 469 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 ZNF143P52747 638 aaPredicted RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 PSMC1P62191 440 aaKnown RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 MESDQ14696 234 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 NFE2Q16621 373 aaPredicted RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 HADHQ16836 314 aaKnown RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 PPP1R26Q5T8A7 1209 aaPredicted RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 SEL1L2Q5TEA6 688 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 WSCD1Q658N2 575 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 FAM171BQ6P995 826 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 C4orf50Q6ZRC1 276 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 PASD1Q8IV76 773 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 SPATA4Q8NEY3 305 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 EXD1Q8NHP7 514 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 COG1Q8WTW3 980 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 SMARCD1Q96GM5 515 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 IGSF21Q96ID5 467 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 RBM41Q96IZ5 413 aaKnown RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 CPXM1Q96SM3 734 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 TBCBQ99426 244 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 SYT15Q9BQS2 421 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 FRMD8P1Q9BZ68 369 aaPredicted RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 FAM129AQ9BZQ8 928 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 GOLGA2P5Q9HBQ8 144 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 CSNK1G1Q9HCP0 422 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 MIOSQ9NXC5 875 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 DDX43Q9NXZ2 648 aaKnown RBP9.6□□□□□ -0.87
PTPRE-207ENST00000471218 FBXL21Q9UKT6 434 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 SPTBN4Q9H254 2564 aa9.6□□□□□ -0.87
PTPRE-207ENST00000471218 PLXNA4Q9HCM2 1894 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 PRR23AA6NEV1 266 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 CASTOR2A6NHX0 329 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 HSF2BPO75031 334 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 ZNF189O75820 626 aaPredicted RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 POMCP01189 267 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 CFHP08603 1231 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 FAM200BP0CF97 657 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 AOC1P19801 751 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 KLRC2P26717 231 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 GBP1P32455 592 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 PTPN9P43378 593 aa9.59□□□□□ -0.87
PTPRE-207ENST00000471218 RBM10P98175 930 aaKnown RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 YWHAHQ04917 246 aaPredicted RBP9.59□□□□□ -0.87
PTPRE-207ENST00000471218 BRD3Q15059 726 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms