RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 RGS9BPQ6ZS82 235 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 CCDC126Q96EE4 140 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 UBE2OQ9C0C9 1292 aaKnown RBP9.84□□□□□ -0.83
UBE3C-205ENST00000470408 TRABDQ9H4I3 376 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 C20orf96Q9NUD7 363 aaPredicted RBP9.84□□□□□ -0.83
UBE3C-205ENST00000470408 BLOC1S4Q9NUP1 217 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 VPS28Q9UK41 221 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 CDH9Q9ULB4 789 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 HEATR9A2RTY3 570 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 EML1O00423 815 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 LZTS3O60299 673 aaPredicted RBP9.84□□□□□ -0.83
UBE3C-205ENST00000470408 USP2O75604 605 aaPredicted RBP9.84□□□□□ -0.83
UBE3C-205ENST00000470408 MYL4P12829 197 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 IRAK1P51617 712 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 NOMO2Q5JPE7 1267 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 FAM43BQ6ZT52 329 aaPredicted RBP9.84□□□□□ -0.83
UBE3C-205ENST00000470408 SLC20A1Q8WUM9 679 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 ZNF606Q8WXB4 792 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 VAT1Q99536 393 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 AFF4Q9UHB7 1163 aaKnown RBP9.84□□□□□ -0.83
UBE3C-205ENST00000470408 GRID1Q9ULK0 1009 aa9.84□□□□□ -0.83
UBE3C-205ENST00000470408 SOAT2O75908 522 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 HNRNPCP07910 306 aaKnown RBP eCLIP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ICAM3P32942 547 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 HADHAP40939 763 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 NR2C2P49116 596 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 PSMD7P51665 324 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 BEX3Q00994 111 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 GRIK3Q13003 919 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 RBBP7Q16576 425 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ANGPTL8Q6UXH0 198 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 LRRC52Q8N7C0 313 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 OSCP1Q8WVF1 389 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SENP8Q96LD8 212 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 FAM161BQ96MY7 647 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 PDGFCQ9NRA1 345 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 TRHDEQ9UKU6 1024 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 PLIN4Q96Q06 1357 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ESYT3A0FGR9 886 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 BTBD19C9JJ37 291 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ADH1AP07327 375 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 LSP1P33241 339 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 RHOAP61586 193 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SUGP1Q8IWZ8 645 aaKnown RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 RXFP2Q8WXD0 754 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SEC16BQ96JE7 1060 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 CEP19Q96LK0 163 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 LRRC1Q9BTT6 524 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 THAP2Q9H0W7 228 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 TSPAN16Q9UKR8 245 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 PAIP2BQ9ULR5 123 aaKnown RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 USP15Q9Y4E8 981 aaPredicted RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SIGLEC1Q9BZZ2 1709 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 OR6C75A6NL08 312 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 TIMM44O43615 452 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 DIAPH2O60879 1101 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 H2AFYO75367 372 aaKnown RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SUPT3HO75486 399 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 FAM107AO95990 144 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 CSH1P0DML2 217 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 CSH2P0DML3 217 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 HOXB8P17481 243 aaPredicted RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 MAGEA4P43358 317 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 RARS2Q5T160 578 aaKnown RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 DCLRE1AQ6PJP8 1040 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 LZICQ8WZA0 190 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 LRRC40Q9H9A6 602 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 RIC8BQ9NVN3 520 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 USP18Q9UMW8 372 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 PTCH2Q9Y6C5 1203 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 MYOM1P52179 1685 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ZNF541Q9H0D2 1346 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 A0A087X0T9 212 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 FAM228BP0C875 321 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 CNTFP26441 200 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 AMHR2Q16671 573 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 FAM83EQ2M2I3 478 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 LRRC49Q8IUZ0 686 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 KIAA0895Q8NCT3 520 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SLC35C1Q96A29 364 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ELMO2Q96JJ3 720 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ZCCHC2Q9C0B9 1178 aaKnown RBP9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ISCUQ9H1K1 167 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SLC40A1Q9NP59 571 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 SCUBE2Q9NQ36 999 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 RAD18Q9NS91 495 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 ABCC13Q9NSE7 274 aa9.83□□□□□ -0.84
UBE3C-205ENST00000470408 H2AFXP16104 143 aaPredicted RBP9.82□□□□□ -0.84
UBE3C-205ENST00000470408 GLRA2P23416 452 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 GRM5P41594 1212 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 CCNG2Q16589 344 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 USP41Q3LFD5 358 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 TTC39BQ5VTQ0 682 aaPredicted RBP9.82□□□□□ -0.84
UBE3C-205ENST00000470408 SLC26A7Q8TE54 656 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 C1QTNF7Q9BXJ2 289 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 GIMAP4Q9NUV9 329 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 XRN1Q8IZH2 1706 aaKnown RBP9.82□□□□□ -0.84
UBE3C-205ENST00000470408 MOXD2PA6NHM9 499 aa9.82□□□□□ -0.84
UBE3C-205ENST00000470408 SDR42E2A6NKP2 422 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms