RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 NAGPAQ9UK23 515 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 SH3BP1Q9Y3L3 701 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 PTPRDP23468 1912 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 OBSL1O75147 1896 aa12.17□□□□□ -0.46
CDHR3-205ENST00000468143 GREB1Q4ZG55 1949 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 PRR23AA6NEV1 266 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 NFATC1O95644 943 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 VDRP11473 427 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 ATP5C1P36542 298 aaKnown RBP12.16□□□□□ -0.46
CDHR3-205ENST00000468143 SLC6A11P48066 632 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 TUBP50607 506 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 CCR3P51677 355 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 APBA1Q02410 837 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 DHCR24Q15392 516 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 GJB7Q6PEY0 223 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 RHBDF2Q6PJF5 856 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 DDX42Q86XP3 938 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDHR3-205ENST00000468143 IRF2BP1Q8IU81 584 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 BBS7Q8IWZ6 715 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 SPEM1Q8N4L4 309 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 GPT2Q8TD30 523 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 CD101Q93033 1021 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
CDHR3-205ENST00000468143 KLF16Q9BXK1 252 aaPredicted RBP12.16□□□□□ -0.46
CDHR3-205ENST00000468143 UBE2TQ9NPD8 197 aaPredicted RBP12.16□□□□□ -0.46
CDHR3-205ENST00000468143 PRMT8Q9NR22 394 aaPredicted RBP12.16□□□□□ -0.46
CDHR3-205ENST00000468143 HESX1Q9UBX0 185 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
CDHR3-205ENST00000468143 E2F8A0AVK6 867 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 ANTXRLA6NF34 631 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 PIK3R2O00459 728 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 SLC9A3R1O14745 358 aaPredicted RBP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 RNF40O75150 1001 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 CYP17A1P05093 508 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 SLC9A1P19634 815 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 BRD2P25440 801 aaKnown RBP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 OPRD1P41143 372 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 MTIF2P46199 727 aaKnown RBP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 TKTL1P51854 596 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 SLC8A3P57103 927 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 DMWDQ09019 674 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 ZNF528Q3MIS6 628 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 C10orf120Q5SQS8 335 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 HEATR6Q6AI08 1181 aaKnown RBP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 CCDC186Q7Z3E2 898 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 MIB1Q86YT6 1006 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 RBBP8NLQ8NC74 664 aaPredicted RBP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 ATRIPQ8WXE1 791 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 EZH1Q92800 747 aaPredicted RBP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 KREMEN1Q96MU8 473 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 ZSWIM1Q9BR11 485 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 FAM124BQ9H5Z6 455 aaPredicted RBP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDHR3-205ENST00000468143 DENND4CQ5VZ89 1909 aa12.15□□□□□ -0.46
CDHR3-205ENST00000468143 CHURC1-FNTBB4DL54 471 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 O00370 1275 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 XPO1O14980 1071 aaKnown RBP12.14□□□□□ -0.47
CDHR3-205ENST00000468143 HMBSP08397 361 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 PAEPP09466 180 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 RALAP11233 206 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 KRT5P13647 590 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 LCP1P13796 627 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 DRD1P21728 446 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 FNTBP49356 437 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 RGS7P49802 495 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 SEC13P55735 322 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 YWHAGP61981 247 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDHR3-205ENST00000468143 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
CDHR3-205ENST00000468143 GAB4Q2WGN9 574 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 RAB41Q5JT25 222 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 LY6G5CQ5SRR4 150 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 ZC3H14Q6PJT7 736 aaKnown RBP12.14□□□□□ -0.47
CDHR3-205ENST00000468143 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 C12orf40Q86WS4 652 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 SYNPOQ8N3V7 929 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 NAT16Q8N8M0 369 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
CDHR3-205ENST00000468143 IER2Q9BTL4 223 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 ULBP1Q9BZM6 244 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 LRRC4Q9HBW1 653 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 ZSCAN32Q9NX65 697 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 TBC1D14Q9P2M4 693 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 DNMT3LQ9UJW3 386 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
CDHR3-205ENST00000468143 MIA3Q5JRA6 1907 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 ANAPC1Q9H1A4 1944 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 K7ESF4 209 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 GABBR2O75899 941 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 ZBED1O96006 694 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 LMNAP02545 664 aaKnown RBP12.13□□□□□ -0.47
CDHR3-205ENST00000468143 ADH5P11766 374 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 TDGF1P13385 188 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 PXNP49023 591 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms