RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 SLU7O95391 586 aaKnown RBP13.61□□□□□ -0.23
COL4A1-202ENST00000467182 PYGMP11217 842 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 ATF6P18850 670 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 DNAJB2P25686 324 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 CTNNB1P35222 781 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 PCK1P35558 622 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 MATKP42679 507 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 PGFP49763 221 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 PITX1P78337 314 aaPredicted RBP13.61□□□□□ -0.23
COL4A1-202ENST00000467182 KRT17Q04695 432 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 ZNF211Q13398 564 aaPredicted RBP13.61□□□□□ -0.23
COL4A1-202ENST00000467182 ATP13A4Q4VNC1 1196 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 SYPL2Q5VXT5 272 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 TPGS2Q68CL5 300 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 BEND5Q7L4P6 421 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 SCD5Q86SK9 330 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 KATNAL2Q8IYT4 538 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 NUP93Q8N1F7 819 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 UBL4BQ8N7F7 174 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 ZNF461Q8TAF7 563 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 SPPL3Q8TCT6 385 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 ACTRT1Q8TDG2 376 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 RNPC3Q96LT9 517 aaKnown RBP13.61□□□□□ -0.23
COL4A1-202ENST00000467182 NPY6RQ99463 290 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 PLVAPQ9BX97 442 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 POPDC2Q9HBU9 364 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL4A1-202ENST00000467182 HSFX1Q9UBD0 423 aa13.61□□□□□ -0.23
COL4A1-202ENST00000467182 TTC7AQ9ULT0 858 aaPredicted RBP13.61□□□□□ -0.23
COL4A1-202ENST00000467182 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 TEX28O15482 410 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 SART1O43290 800 aaKnown RBP13.6□□□□□ -0.23
COL4A1-202ENST00000467182 ENDOD1O94919 500 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 LTFP02788 710 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 ATF2P15336 505 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 MIPP30301 263 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 SDC4P31431 198 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 NOS2P35228 1153 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 HDAC4P56524 1084 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 RWDD2BP57060 319 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 ERVFC1P60507 584 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 MGAT5BQ3V5L5 792 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 POLNQ7Z5Q5 900 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 GPR152Q8TDT2 470 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 FAM172AQ8WUF8 416 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 FAM149B1Q96BN6 582 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 TBCBQ99426 244 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 SEPT5Q99719 369 aaPredicted RBP13.6□□□□□ -0.23
COL4A1-202ENST00000467182 HERPUD2Q9BSE4 406 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 NMUR1Q9HB89 426 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
COL4A1-202ENST00000467182 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL4A1-202ENST00000467182 MRPL17Q9NRX2 175 aaKnown RBP13.6□□□□□ -0.23
COL4A1-202ENST00000467182 RNF14Q9UBS8 474 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 YBX2Q9Y2T7 364 aaKnown RBP13.6□□□□□ -0.23
COL4A1-202ENST00000467182 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
COL4A1-202ENST00000467182 C3orf70A6NLC5 250 aaPredicted RBP13.59□□□□□ -0.23
COL4A1-202ENST00000467182 FSCN2O14926 492 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CEP104O60308 925 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 TADA3O75528 432 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 TRUB2O95900 331 aaKnown RBP13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CA3P07451 260 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CNPP09543 421 aaKnown RBP13.59□□□□□ -0.23
COL4A1-202ENST00000467182 ATXN1P54253 815 aaKnown RBP13.59□□□□□ -0.23
COL4A1-202ENST00000467182 ATP11AP98196 1134 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CKAP4Q07065 602 aaKnown RBP13.59□□□□□ -0.23
COL4A1-202ENST00000467182 MTMR3Q13615 1198 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CAMK1Q14012 370 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CDO1Q16878 200 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 SLC25A52Q3SY17 297 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 BSPRYQ5W0U4 402 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 STRADAQ7RTN6 431 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CEP112Q8N8E3 955 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 MYRIPQ8NFW9 859 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 POF1BQ8WVV4 589 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 CEP295NLQ96MC4 621 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 COMMD8Q9NX08 183 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 OSER1Q9NX31 292 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 SSX2IPQ9Y2D8 614 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 IRAK3Q9Y616 596 aa13.59□□□□□ -0.23
COL4A1-202ENST00000467182 SLC38A8A6NNN8 435 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 CTIFO43310 598 aaKnown RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 RNF8O76064 485 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 CXCL14O95715 111 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 RB1P06400 928 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 PBX2P40425 430 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 TUFMP49411 452 aaKnown RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 SULT1E1P49888 294 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 ARSEP51690 589 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 YWHAGP61981 247 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 RPL10AP62906 217 aaKnown RBP13.58□□□□□ -0.24
COL4A1-202ENST00000467182 CREMQ03060 361 aa13.58□□□□□ -0.24
COL4A1-202ENST00000467182 UBE3AQ05086 875 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms