RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 PCNX2A6NKB5 2137 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 SGK1O00141 431 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 TNFRSF10BO14763 440 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 SCAMP3O14828 347 aaKnown RBP12.66□□□□□ -0.38
GTF3A-205ENST00000466776 HOXC11O43248 304 aaPredicted RBP12.66□□□□□ -0.38
GTF3A-205ENST00000466776 AP5Z1O43299 807 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 AP1G2O75843 785 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 RPN1P04843 607 aaKnown RBP12.66□□□□□ -0.38
GTF3A-205ENST00000466776 CEACAM1P13688 526 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 BCKDHBP21953 392 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 P2RY2P41231 377 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 AFMP43652 599 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 SLC6A11P48066 632 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 CACNA2D1P54289 1103 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 ANO4Q32M45 955 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 ATL3Q6DD88 541 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 SCARA5Q6ZMJ2 495 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 ZNF513Q8N8E2 541 aaPredicted RBP12.66□□□□□ -0.38
GTF3A-205ENST00000466776 HMGB4Q8WW32 186 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 TAF4BQ92750 862 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 KCNK16Q96T55 309 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 XYLT2Q9H1B5 865 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 SPHK2Q9NRA0 654 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 KRT82Q9NSB4 513 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 EXOC1Q9NV70 894 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 CHORDC1Q9UHD1 332 aaPredicted RBP12.66□□□□□ -0.38
GTF3A-205ENST00000466776 LSM7Q9UK45 103 aaKnown RBP12.66□□□□□ -0.38
GTF3A-205ENST00000466776 CFAP45Q9UL16 551 aa12.66□□□□□ -0.38
GTF3A-205ENST00000466776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
GTF3A-205ENST00000466776 LRRIQ3A6PVS8 624 aaPredicted RBP12.65□□□□□ -0.38
GTF3A-205ENST00000466776 KIF20AO95235 890 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 CSRP1P21291 193 aaKnown RBP12.65□□□□□ -0.38
GTF3A-205ENST00000466776 HOXD12P35452 270 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 KIR2DL1P43626 348 aaPredicted RBP12.65□□□□□ -0.38
GTF3A-205ENST00000466776 CASP4P49662 377 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 ATXN3P54252 364 aaPredicted RBP12.65□□□□□ -0.38
GTF3A-205ENST00000466776 CDH8P55286 799 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 TRIM61Q5EBN2 209 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 SH3PXD2AQ5TCZ1 1133 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 LYSMD4Q5XG99 296 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 SLC36A4Q6YBV0 504 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 RABEPKQ7Z6M1 372 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 UNC93AQ86WB7 457 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 C12orf40Q86WS4 652 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 SYT12Q8IV01 421 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 SLC9A9Q8IVB4 645 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 SCAMP5Q8TAC9 235 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 XPO6Q96QU8 1125 aaKnown RBP12.65□□□□□ -0.38
GTF3A-205ENST00000466776 SLC32A1Q9H598 525 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 CCSER2Q9H7U1 834 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.65□□□□□ -0.38
GTF3A-205ENST00000466776 TMEM30AQ9NV96 361 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 GMIPQ9P107 970 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 FRMD4BQ9Y2L6 1034 aa12.65□□□□□ -0.38
GTF3A-205ENST00000466776 USP24Q9UPU5 2620 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 FAM92AA1XBS5 289 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 TLR5O60602 858 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 TULP3O75386 442 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 C4BPAP04003 597 aaKnown RBP12.64□□□□□ -0.39
GTF3A-205ENST00000466776 ZDHHC11BP0C7U3 371 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 FAM200BP0CF97 657 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 IRF1P10914 325 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 HOXB2P14652 356 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 CASP1P29466 404 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 CLDN10P78369 228 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 IRX4P78413 519 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 FOXC1Q12948 553 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 CUL4BQ13620 913 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 UAP1L1Q3KQV9 507 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
GTF3A-205ENST00000466776 RESP18Q5W5W9 173 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 BBS7Q8IWZ6 715 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 ETFBKMTQ8IXQ9 262 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 TMEFF1Q8IYR6 380 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 FUKQ8N0W3 1084 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 NAT16Q8N8M0 369 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 TERB1Q8NA31 727 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 CEP76Q8TAP6 659 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 RLN3Q8WXF3 142 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
GTF3A-205ENST00000466776 CCDC47Q96A33 483 aaKnown RBP12.64□□□□□ -0.39
GTF3A-205ENST00000466776 ZFRQ96KR1 1074 aaKnown RBP12.64□□□□□ -0.39
GTF3A-205ENST00000466776 IL37Q9NZH6 218 aa12.64□□□□□ -0.39
GTF3A-205ENST00000466776 PATE3B3GLJ2 98 aa12.63□□□□□ -0.39
GTF3A-205ENST00000466776 PDXKO00764 312 aa12.63□□□□□ -0.39
GTF3A-205ENST00000466776 IKBKBO14920 756 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms