RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 DPP3Q9NY33 737 aa7.14□□□□□ -1.27
CDHR3-204ENST00000466351 NOP53Q9NZM5 478 aaKnown RBP7.14□□□□□ -1.27
CDHR3-204ENST00000466351 CNTN3Q9P232 1028 aa7.14□□□□□ -1.27
CDHR3-204ENST00000466351 NXF1Q9UBU9 619 aaKnown RBP7.14□□□□□ -1.27
CDHR3-204ENST00000466351 HESX1Q9UBX0 185 aa7.14□□□□□ -1.27
CDHR3-204ENST00000466351 CYTH4Q9UIA0 394 aa7.14□□□□□ -1.27
CDHR3-204ENST00000466351 PHTF1Q9UMS5 762 aa7.14□□□□□ -1.27
CDHR3-204ENST00000466351 SORCS3Q9UPU3 1222 aa7.14□□□□□ -1.27
CDHR3-204ENST00000466351 SMIM35A0A1B0GVV1 85 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 MBLAC1A4D2B0 266 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 AP3B1O00203 1094 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 LIN7AO14910 233 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 BIRC5O15392 142 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 B4GALT5O43286 388 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TSPAN1O60635 241 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 KRT38O76015 456 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TMEM63AO94886 807 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 ZBTB7AO95365 584 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 CALCAP01258 141 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 INHBAP08476 426 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 KRT19P08727 400 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 SNRPAP09012 282 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 PDGFRAP16234 1089 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 KRT4P19013 534 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 DNAJB2P25686 324 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 MARK3P27448 753 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 FOXN2P32314 431 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 ETV4P43268 484 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 CLCN3P51790 818 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 NDST1P52848 882 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 CDH6P55285 790 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 FKBP1BP68106 108 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 SLC6A3Q01959 620 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 BST2Q10589 180 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 PDAP1Q13442 181 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 SEMA5AQ13591 1074 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 KRT72Q14CN4 511 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 FASTKD3Q14CZ7 662 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 LRRC14Q15048 493 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 DUSP28Q4G0W2 176 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 XKR4Q5GH76 650 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 WASHC2DQ5SRD0 308 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TTC39BQ5VTQ0 682 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 STEAP4Q687X5 459 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TXNRD3NBQ6F5E7 133 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TAPT1Q6NXT6 567 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 NOTUMQ6P988 496 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 MTHFD1LQ6UB35 978 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 C3orf62Q6ZUJ4 267 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 LRRC6Q86X45 466 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TRIM50Q86XT4 487 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 ECHDC2Q86YB7 292 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 APLFQ8IW19 511 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 FBXO16Q8IX29 292 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 PALM2Q8IXS6 379 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 VPS52Q8N1B4 723 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 ARHGAP24Q8N264 748 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 ZNF276Q8N554 614 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 FITM2Q8N6M3 262 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 FBXO36Q8NEA4 188 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 GPRC5AQ8NFJ5 357 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 FBXO41Q8TF61 875 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 SLC35F5Q8WV83 523 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 ZNF75CPQ92670 426 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 QKIQ96PU8 341 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 SLC9A7Q96T83 725 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 C16orf70Q9BSU1 422 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TRIM55Q9BYV6 548 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 BRD8Q9H0E9 1235 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 MINDY3Q9H8M7 445 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 USP29Q9HBJ7 922 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 PCDH18Q9HCL0 1135 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 GEMIN8Q9NWZ8 242 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TBK1Q9UHD2 729 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 XPO7Q9UIA9 1087 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 TSPAN16Q9UKR8 245 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 UBQLN1Q9UMX0 589 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 MTO1Q9Y2Z2 717 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.13□□□□□ -1.27
CDHR3-204ENST00000466351 PTPRDP23468 1912 aa7.13□□□□□ -1.27
CDHR3-204ENST00000466351 MYO18AQ92614 2054 aaKnown RBP7.12□□□□□ -1.27
CDHR3-204ENST00000466351 NRCAMQ92823 1304 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 A0A087WZ62 844 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 TCRBV9S1A1TA0A576 114 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 ERI2A8K979 691 aaKnown RBP7.12□□□□□ -1.27
CDHR3-204ENST00000466351 E5RJQ4 531 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 POC1B-GALNT4F8VUJ3 575 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 GOLGA8SH3BPF8 625 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 H3BRB1 525 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 IGF2BP3O00425 579 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDHR3-204ENST00000466351 NCAM2O15394 837 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 MTSS1O43312 755 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 OPHN1O60890 802 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 CSDE1O75534 798 aaKnown RBP7.12□□□□□ -1.27
CDHR3-204ENST00000466351 LUC7L3O95232 432 aaKnown RBP7.12□□□□□ -1.27
CDHR3-204ENST00000466351 ZBED1O96006 694 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 C1QAP02745 245 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 MT-ND3P03897 115 aa7.12□□□□□ -1.27
CDHR3-204ENST00000466351 ZSCAN5DPP0CG00 497 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms