RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZNF446Q9NWS9 450 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 ATG2AQ2TAZ0 1938 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 ANKRD62A6NC57 917 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 PDE2AO00408 941 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 ZNF185O15231 689 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 LCP1P13796 627 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 ACADSBP45954 432 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 TKTL1P51854 596 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 C1QBPQ07021 282 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 MTMR3Q13615 1198 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 DENND5BQ6ZUT9 1274 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 RTL10Q7L3V2 364 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 SCUBE3Q8IX30 993 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 NUP93Q8N1F7 819 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 MMGT1Q8N4V1 131 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 TPCN2Q8NHX9 752 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 RFFLQ8WZ73 363 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 RUBCNQ92622 972 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 VCPIP1Q96JH7 1222 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 CEP295NLQ96MC4 621 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 EPC1Q9H2F5 836 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 SYNCQ9H7C4 482 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 ARFGAP3Q9NP61 516 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 FAM53CQ9NYF3 392 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 OGFRQ9NZT2 677 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 USP3Q9Y6I4 520 aa17.77■□□□□ 0.44
EXOSC3-203ENST00000465229 SLC38A8A6NNN8 435 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 PAPSS1O43252 624 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 ZMYND10O75800 440 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 IGFBP4P22692 258 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 PAFAH1B1P43034 410 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 HADHBP55084 474 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 USP46P62068 366 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 ADIGQ0VDE8 80 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 CYP4A22Q5TCH4 519 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 CC2D1AQ6P1N0 951 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 COG1Q8WTW3 980 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 CTNNBL1Q8WYA6 563 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 IL37Q9NZH6 218 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 DPP7Q9UHL4 492 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 PLXNA3P51805 1871 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 ERLIN1O75477 346 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 RFPL2O75678 378 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 CALB1P05937 261 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 ABCB4P21439 1286 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 NOP2P46087 812 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 EPHB3P54753 998 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 SNX16P57768 344 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 PPM1LQ5SGD2 360 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 Q7L0L9 218 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 PHLDB2Q86SQ0 1253 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 XYLT1Q86Y38 959 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 ULBP1Q9BZM6 244 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 MIS12Q9H081 205 aa17.76■□□□□ 0.43
EXOSC3-203ENST00000465229 NCK2O43639 380 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 LRG1P02750 347 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 HMGA1P17096 107 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 RRM1P23921 792 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 PLD1Q13393 1074 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 ZNF268Q14587 947 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 RPS6KA1Q15418 735 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 CCDC181Q5TID7 509 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 PM20D1Q6GTS8 502 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 CCDC70Q6NSX1 233 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 TMEM184AQ6ZMB5 413 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 DNAJB7Q7Z6W7 309 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 SIX6OS1Q8N1H7 587 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 EFHBQ8N7U6 833 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 CLEC4CQ8WTT0 213 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 NDRG1Q92597 394 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 PSMG2Q969U7 264 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 GAS2L1Q99501 681 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 THAP2Q9H0W7 228 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 CNGB3Q9NQW8 809 aa17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 CHORDC1Q9UHD1 332 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-203ENST00000465229 FAM92AA1XBS5 289 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 CCL16O15467 120 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 RTN3O95197 1032 aaPredicted RBP17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 GLP2RO95838 553 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 FTCDO95954 541 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 ZBED1O96006 694 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 USP17L7P0C7H9 530 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 RHOXF2BP0C7M4 288 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 CSH1P0DML2 217 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 CSH2P0DML3 217 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 HOXA9P31269 272 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 IFRD2Q12894 506 aaPredicted RBP17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 VEPH1Q14D04 833 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 OR6B2Q6IFH4 312 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 FAM183BPQ6ZVS7 135 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 SPATA4Q8NEY3 305 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 ZNF653Q96CK0 615 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 MCRS1Q96EZ8 462 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 PBKQ96KB5 322 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 MYRFLQ96LU7 910 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 PNKPQ96T60 521 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 RHOXF2Q9BQY4 288 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 TTLL2Q9BWV7 592 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms