RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 AMHP03971 560 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 ATF2P15336 505 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 ITIH2P19823 946 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 TYMPP19971 482 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 PCSK1P29120 753 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 CHKAP35790 457 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 CCT5P48643 541 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 SLC11A1P49279 550 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 ITGA8P53708 1063 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 DEFB103AP81534 67 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 PIGHQ14442 188 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-205ENST00000464187 TXNRD3NBQ6F5E7 133 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 OVOS1Q6IE37 1185 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 MFSD7Q6UXD7 560 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 RTP3Q9BQQ7 232 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 SYNCQ9H7C4 482 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 CRTAC1Q9NQ79 661 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 FEZ2Q9UHY8 353 aaPredicted RBP15.2■□□□□ 0.02
COL5A1-205ENST00000464187 ADAM28Q9UKQ2 775 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 CDH9Q9ULB4 789 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 PCDHB8Q9UN66 801 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 MICAL3Q7RTP6 2002 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 GOLGA8SH3BPF8 625 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 TULP2O00295 520 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 GALTP07902 379 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 KRT10P13645 584 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 TKTP29401 623 aaKnown RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 PBX3P40426 434 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 CETN2P41208 172 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 WDR5P61964 334 aaKnown RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 YWHAHQ04917 246 aaPredicted RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 PDE4CQ08493 712 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 ODF2Q5BJF6 829 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 SPOCD1Q6ZMY3 1216 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 OTOP2Q7RTS6 562 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 TMCO2Q7Z6W1 182 aaPredicted RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 SRLQ86TD4 932 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 FUKQ8N0W3 1084 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 UHMK1Q8TAS1 419 aaKnown RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 SLC35F5Q8WV83 523 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 HNRNPABQ99729 332 aaKnown RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 ACBD6Q9BR61 282 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 TMEM175Q9BSA9 504 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 TMEM109Q9BVC6 243 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 EPN3Q9H201 632 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 CDC42EP4Q9H3Q1 356 aaKnown RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 IL23AQ9NPF7 189 aa15.19■□□□□ 0.02
COL5A1-205ENST00000464187 RRP15Q9Y3B9 282 aaKnown RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 LAMA2P24043 3122 aaKnown RBP15.19■□□□□ 0.02
COL5A1-205ENST00000464187 MYBPHLA2RUH7 354 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 NT5C1B-RDH14C9J2C7 533 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 ERBB2P04626 1255 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 PTPN7P35236 360 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 GABRB2P47870 512 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 VPS41P49754 854 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 CDR1P51861 262 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 BCAT1P54687 386 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 GSCP56915 257 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-205ENST00000464187 BST2Q10589 180 aaKnown RBP15.18■□□□□ 0.02
COL5A1-205ENST00000464187 KAZNQ674X7 775 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 PMF1Q6P1K2 205 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 FAM117BQ6P1L5 589 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 TRMT10CQ7L0Y3 403 aaKnown RBP15.18■□□□□ 0.02
COL5A1-205ENST00000464187 JOSD2Q8TAC2 188 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 ACSF2Q96CM8 615 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-205ENST00000464187 PGM2Q96G03 612 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 DDX23Q9BUQ8 820 aaKnown RBP15.18■□□□□ 0.02
COL5A1-205ENST00000464187 COLEC11Q9BWP8 271 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 MARCH5Q9NX47 278 aa15.18■□□□□ 0.02
COL5A1-205ENST00000464187 hCG_1818297A0A087WSY0 165 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 SIGLEC16A6NMB1 481 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 SRRM3A6NNA2 597 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-205ENST00000464187 E5RJQ4 531 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 CLDN5O00501 218 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 LIASO43766 372 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 BAIAP3O94812 1187 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 SETSIPP0DME0 302 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 KLRC2P26717 231 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 RFC1P35251 1148 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-205ENST00000464187 RGS7P49802 495 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 BCAR1P56945 870 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 COPS2P61201 443 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 CAV1Q03135 178 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 PPARDQ03181 441 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 ZFYVE27Q5T4F4 411 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 PAQR9Q6ZVX9 377 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 C16orf59Q7L2K0 433 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 TMEM173Q86WV6 379 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-205ENST00000464187 XYLT1Q86Y38 959 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 THEM5Q8N1Q8 247 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 OR10T2Q8NGX3 314 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 EPS8L3Q8TE67 593 aaKnown RBP15.17■□□□□ 0.02
COL5A1-205ENST00000464187 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
COL5A1-205ENST00000464187 RAPGEF5Q92565 580 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 BADQ92934 168 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 PCED1BQ96HM7 432 aa15.17■□□□□ 0.02
COL5A1-205ENST00000464187 DDX56Q9NY93 547 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms