RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 CLDN23Q96B33 292 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 OTUB2Q96DC9 234 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 SIX2Q9NPC8 291 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 TBC1D14Q9P2M4 693 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 CPQQ9Y646 472 aa13.76□□□□□ -0.21
R3HDM1-213ENST00000463230 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 LEFTY2O00292 366 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 KRT5P13647 590 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 PTPN5P54829 565 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 PDE4CQ08493 712 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 GOLGA8FQ08AF8 430 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 GOLGA8DPQ0D2H9 430 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 RUNX3Q13761 415 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 TFAP2BQ92481 460 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 FAM3CQ92520 227 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 HSFY1Q96LI6 401 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 RNF38Q9H0F5 515 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 LIMA1Q9UHB6 759 aaKnown RBP13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 CHORDC1Q9UHD1 332 aaPredicted RBP13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 RNF225M0QZC1 329 aaPredicted RBP13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 CYP26A1O43174 497 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 TLR5O60602 858 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 NFATC1O95644 943 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 NR1H3Q13133 447 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 FKBP15Q5T1M5 1219 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 DTWD2Q8NBA8 298 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 STK32AQ8WU08 396 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 IRGQQ8WZA9 623 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 HPS4Q9NQG7 708 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 CNGB3Q9NQW8 809 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 FANCLQ9NW38 375 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
R3HDM1-213ENST00000463230 SHISA7A6NL88 538 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 FAM170BA6NMN3 283 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 SPECC1L-ADORA2AF8WAN1 911 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 FBXO21O94952 628 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 ZBED1O96006 694 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 CTHP32929 405 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 ATP5C1P36542 298 aaKnown RBP13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 TKTL1P51854 596 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 BPIFB4P59827 614 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 LRRC32Q14392 662 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 KRT31Q15323 416 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 IER5LQ5T953 404 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 ZNF687Q8N1G0 1237 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 SLC35F5Q8WV83 523 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 NACA2Q9H009 215 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 OLA1Q9NTK5 396 aaKnown RBP13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 DNMT3LQ9UJW3 386 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 LRRC10BA6NIK2 292 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 M0QYV0 167 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 CAVIN2O95810 425 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 RARGP13631 454 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 ZNF18P17022 549 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 BRD2P25440 801 aaKnown RBP13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 ACADSBP45954 432 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 RPL34P49207 117 aaKnown RBP13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 UBXN2BQ14CS0 331 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 EML3Q32P44 896 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 DGKKQ5KSL6 1271 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 DPY19L2P1Q6NXN4 242 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 MAMSTRQ6ZN01 415 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 SIX6OS1Q8N1H7 587 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 RIN3Q8TB24 985 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 ZFYVE19Q96K21 471 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 ZFRQ96KR1 1074 aaKnown RBP13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 FOXQ1Q9C009 403 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 CCSER2Q9H7U1 834 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 TAB2Q9NYJ8 693 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 NAGPAQ9UK23 515 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 DNAJC12Q9UKB3 198 aa13.74□□□□□ -0.21
R3HDM1-213ENST00000463230 A0A1W2PQH9 124 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 SART1O43290 800 aaKnown RBP13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 TARSP26639 723 aaKnown RBP13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 GNA15P30679 374 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 KLHDC7AQ5VTJ3 777 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 SCD5Q86SK9 330 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 ZSWIM1Q9BR11 485 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 KLF16Q9BXK1 252 aaPredicted RBP13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 ECT2Q9H8V3 914 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 NMUR1Q9HB89 426 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 CFAP97Q9P2B7 532 aa13.73□□□□□ -0.21
R3HDM1-213ENST00000463230 LGALS16A8MUM7 142 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 BECN2A8MW95 431 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 PI15O43692 258 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 COPB1P53618 953 aaKnown RBP13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 YWHAGP61981 247 aaKnown RBP eCLIP13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 PTK2Q05397 1052 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 KCNMA1Q12791 1236 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 NCAPHQ15003 741 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 ANO6Q4KMQ2 910 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms