RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 HPSEQ9Y251 543 aa3.34□□□□□ -1.88
SMC4-203ENST00000462668 ZFP37Q9Y6Q3 630 aaPredicted RBP3.34□□□□□ -1.88
SMC4-203ENST00000462668 AOX1Q06278 1338 aa3.34□□□□□ -1.88
SMC4-203ENST00000462668 STX16-NPEPL1H3BU86 382 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 STX16O14662 325 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 COQ9O75208 318 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 UBL4AP11441 157 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 PTDSS1P48651 473 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 HSD17B4P51659 736 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 LOXL3P58215 753 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 STK4Q13043 487 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 RSPO4Q2I0M5 234 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 MED25Q71SY5 747 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 WDR60Q8WVS4 1066 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 OVCA2Q8WZ82 227 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MASTLQ96GX5 879 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ZNF764Q96H86 408 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 LRIG1Q96JA1 1093 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 C11orf84Q9BUA3 381 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 MRI1Q9BV20 369 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 PACSIN1Q9BY11 444 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MS4A7Q9GZW8 240 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 BEX4Q9NWD9 120 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 BTBD3Q9Y2F9 522 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMC4-203ENST00000462668 SMARCA2P51531 1590 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CCDC151A5D8V7 595 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 LIPT2A6NK58 231 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 AGPSO00116 658 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 LDLRAD4O15165 306 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 GCSHP23434 173 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CTNNA1P35221 906 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 GARSP41250 739 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 GPD2P43304 727 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 TBR1Q16650 682 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ANKRD45Q5TZF3 282 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 GARNL3Q5VVW2 1013 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 KAZNQ674X7 775 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 NUGGCQ68CJ6 796 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 HTR3DQ70Z44 454 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 SLC35B2Q8TB61 432 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 METTL6Q8TCB7 284 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 FUBP1Q96AE4 644 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 SYTL4Q96C24 671 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 NOX5Q96PH1 765 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 RNF32Q9H0A6 362 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 SLC25A32Q9H2D1 315 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ERVMER34-1Q9H9K5 563 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 PAK6Q9NQU5 681 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 MBNL3Q9NUK0 354 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 CDH22Q9UJ99 828 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 A0A1W2PQ27 194 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 A0A1W2PQ64 194 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 A0A1W2PQC6 194 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 A0A1W2PQD8 194 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 TCRBV7S2A1N4TA0A589 114 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 FRMD3A2A2Y4 597 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 C17orf100A8MU93 164 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 TEX22C9J3V5 150 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 H7C4K7 107 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MATN2O00339 956 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 TSPAN9O75954 239 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 GNAI2P04899 355 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 SLC3A2P08195 630 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 SRGAP2BP0DMP2 458 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 TPH1P17752 444 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 NNMTP40261 264 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 HADHAP40939 763 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 PNPLA4P41247 253 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MC1RQ01726 317 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 PTH1RQ03431 593 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 DUSP2Q05923 314 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 BFSP1Q12934 665 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 THOC5Q13769 683 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 BAATQ14032 418 aaPredicted RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 KCNJ12Q14500 433 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 RASA2Q15283 850 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 Q6ZUG5 572 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CHD1LQ86WJ1 897 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 EXD3Q8N9H8 876 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 FNIP1Q8TF40 1166 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 TIGD1Q96MW7 591 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 SEPT11Q9NVA2 429 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 SEMA5BQ9P283 1151 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CHD1O14646 1710 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 M0QZQ0 153 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 HSPA4LO95757 839 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 VIPP01282 170 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MPOP05164 745 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 FYNP06241 537 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CYP2C8P10632 490 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 CHN1P15882 459 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ICAM3P32942 547 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 GZMKP49863 264 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 ALDH3A2P51648 485 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 PPP5CP53041 499 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 MVDP53602 400 aa3.33□□□□□ -1.88
SMC4-203ENST00000462668 TBL3Q12788 808 aaKnown RBP3.33□□□□□ -1.88
SMC4-203ENST00000462668 MAMLD1Q13495 774 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms