RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 C1QTNF3-AMACRE9PGA6 284 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 EXOC5O00471 708 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 EIF5BO60841 1220 aaKnown RBP3.62□□□□□ -1.83
VCL-203ENST00000461383 PPP6R2O75170 966 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 POLBP06746 335 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 PDHA1P08559 390 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 PPP3CBP16298 524 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 DRD1P21728 446 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 DDIT3P35638 169 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 MAGEA10P43363 369 aaPredicted RBP3.62□□□□□ -1.83
VCL-203ENST00000461383 PRKAA2P54646 552 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 ADAM17P78536 824 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 FAM189BP81408 668 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 GUCY1B3Q02153 619 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 ITIH3Q06033 890 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 CUL4BQ13620 913 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 SLC12A1Q13621 1099 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 TOB2Q14106 344 aaPredicted RBP3.62□□□□□ -1.83
VCL-203ENST00000461383 BEAN1Q3B7T3 259 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 TIGD2Q4W5G0 525 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 ZNF569Q5MCW4 686 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 SLC9A4Q6AI14 798 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 NFRKBQ6P4R8 1299 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 KRT27Q7Z3Y8 459 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 MAATS1Q7Z4T9 603 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 RAB11FIP4Q86YS3 637 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 TMPRSS6Q8IU80 811 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 P3H2Q8IVL5 708 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 C1orf210Q8IVY1 113 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 PALM2Q8IXS6 379 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 OR1N1Q8NGS0 311 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 OR6Y1Q8NGX8 325 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 SLC30A5Q8TAD4 765 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 SPPL3Q8TCT6 385 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 CSGALNACT1Q8TDX6 532 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 XAGE5Q8WWM1 108 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 THAP4Q8WY91 577 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 RSC1A1Q92681 617 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 RILPL2Q969X0 211 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 NACC2Q96BF6 587 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 VPS50Q96JG6 964 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 SEC62Q99442 399 aaKnown RBP3.62□□□□□ -1.83
VCL-203ENST00000461383 NUDT22Q9BRQ3 303 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 VN1R3Q9BXE9 311 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 C1QTNF3Q9BXJ4 246 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 AMBRA1Q9C0C7 1298 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 TMPRSS5Q9H3S3 457 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 VPS45Q9NRW7 570 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 TMEM74BQ9NUR3 256 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 NKX1-2Q9UD57 310 aaPredicted RBP3.62□□□□□ -1.83
VCL-203ENST00000461383 PGAP2Q9UHJ9 254 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 NFU1Q9UMS0 254 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 DRG1Q9Y295 367 aaKnown RBP3.62□□□□□ -1.83
VCL-203ENST00000461383 SSX2IPQ9Y2D8 614 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 SLC27A6Q9Y2P4 619 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 CRYL1Q9Y2S2 319 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 A1L4Q6 167 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 OR2W5A6NFC9 320 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 GRXCR1A8MXD5 290 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 B9A039 149 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 H0Y3Z8 333 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 SLC16A3O15427 465 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 TAF5LO75529 589 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 TMEM225BP0DP42 221 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 LIPAP38571 399 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 PDE1AP54750 535 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 NXPH1P58417 271 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 EIF4A1P60842 406 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 ACTR2P61160 394 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 TIAL1Q01085 375 aaKnown RBP eCLIP3.61□□□□□ -1.83
VCL-203ENST00000461383 RNASELQ05823 741 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 DDX10Q13206 875 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 G3BP1Q13283 466 aaKnown RBP eCLIP3.61□□□□□ -1.83
VCL-203ENST00000461383 BFSP2Q13515 415 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 GRM4Q14833 912 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 SF3B3Q15393 1217 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 TBCCQ15814 346 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 LY6KQ17RY6 165 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 RSRC2Q7L4I2 434 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 LRRTM4Q86VH4 590 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 CAND1Q86VP6 1230 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 FAM109AQ8N4B1 249 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 TMEM57Q8N5G2 664 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 NGDNQ8NEJ9 315 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 PPHLN1Q8NEY8 458 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 CEP70Q8NHQ1 597 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 SSH3Q8TE77 659 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 SLC25A43Q8WUT9 341 aaPredicted RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 GLG1Q92896 1179 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 FKBP10Q96AY3 582 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 R3HDM4Q96D70 268 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 PPM1MQ96MI6 270 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 COG8Q96MW5 612 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 HAPLN3Q96S86 360 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 CDK5RAP1Q96SZ6 601 aaKnown RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 TTPALQ9BTX7 342 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 SLC26A6Q9BXS9 759 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 CCDC134Q9H6E4 229 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 FBXO28Q9NVF7 368 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms