RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 ZBTB41Q5SVQ8 909 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 FAM171A1Q5VUB5 890 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 TDRD10Q5VZ19 366 aaKnown RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 ADALQ6DHV7 355 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 CES5AQ6NT32 575 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 PDXDC1Q6P996 788 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 C22orf34Q6ZV56 151 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 CEP57Q86XR8 500 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 CD302Q8IX05 232 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 DTWD2Q8NBA8 298 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 LNX1Q8TBB1 728 aaPredicted RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 C18orf25Q96B23 403 aaPredicted RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 CHAMP1Q96JM3 812 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 B3GALT6Q96L58 329 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 NECTIN4Q96NY8 510 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 ACCSQ96QU6 501 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 TSPAN18Q96SJ8 248 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 C7orf25Q9BPX7 421 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 APOL5Q9BWW9 433 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 PHF7Q9BWX1 381 aaPredicted RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 TMEM206Q9H813 350 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 RPF1Q9H9Y2 349 aaKnown RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 PCMTD2Q9NV79 361 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 ACTR10Q9NZ32 417 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 DPP7Q9UHL4 492 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 CPSF3Q9UKF6 684 aaKnown RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 UBQLN1Q9UMX0 589 aaKnown RBP7.48□□□□□ -1.21
NUP50-212ENST00000461194 CUL9Q8IWT3 2517 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 ATG2AQ2TAZ0 1938 aa7.48□□□□□ -1.21
NUP50-212ENST00000461194 FAM237AA0A1B0GTK4 181 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 LACTBL1A8MY62 500 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 LOC730098B7Z3J9 87 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 TISP43B9A030 160 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 TGM5O43548 720 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 XPOTO43592 962 aaKnown RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 PRPF6O94906 941 aaKnown RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 PAPLNO95428 1278 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 GLUD1P00367 558 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 BRCC3P46736 316 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 ASIC1P78348 528 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 NUCB2P80303 420 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 SPAG1Q07617 926 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 BNIP3Q12983 259 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 PSMD5Q16401 504 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 ATAT1Q5SQI0 421 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 LILRA6Q6PI73 481 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 PRSS55Q6UWB4 352 aaPredicted RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 STXBP4Q6ZWJ1 553 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 UNC13DQ70J99 1090 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 CEP57L1Q8IYX8 460 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 C12orf76Q8N812 135 aaPredicted RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 CMASQ8NFW8 434 aaPredicted RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 PIWIL2Q8TC59 973 aaKnown RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 HDAC7Q8WUI4 952 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 POMGNT1Q8WZA1 660 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 UBE2FQ969M7 185 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 CLSTN3Q9BQT9 956 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 FGFBP2Q9BYJ0 223 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 IKZF4Q9H2S9 585 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 PLEKHA4Q9H4M7 779 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 ASB7Q9H672 318 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 SFXN1Q9H9B4 322 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 TUBGCP4Q9UGJ1 667 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 FBXL21Q9UKT6 434 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 AGO2Q9UKV8 859 aaKnown RBP7.47□□□□□ -1.21
NUP50-212ENST00000461194 HPSEQ9Y251 543 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 NUB1Q9Y5A7 615 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 SNX11Q9Y5W9 270 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 BACE2Q9Y5Z0 518 aa7.47□□□□□ -1.21
NUP50-212ENST00000461194 TCF20Q9UGU0 1960 aaKnown RBP7.46□□□□□ -1.21
NUP50-212ENST00000461194 A0A1B0GVL5 298 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 PVALEFA0A1B0GWK0 134 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 A0A1W2PQ27 194 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 A0A1W2PQ64 194 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 A0A1W2PQD8 194 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 WASH4PA8MWX3 477 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 PI4K2BG5E9Z4 385 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 H3BS24 57 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 I3L4J1 428 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 SYN3O14994 580 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 EIF3DO15371 548 aaKnown RBP eCLIP7.46□□□□□ -1.22
NUP50-212ENST00000461194 HYAL3O43820 417 aaPredicted RBP7.46□□□□□ -1.22
NUP50-212ENST00000461194 LDHAP00338 332 aaKnown RBP7.46□□□□□ -1.22
NUP50-212ENST00000461194 PFKFB1P16118 471 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 RPL17P18621 184 aaKnown RBP7.46□□□□□ -1.22
NUP50-212ENST00000461194 TKTP29401 623 aaKnown RBP7.46□□□□□ -1.22
NUP50-212ENST00000461194 MTHFRP42898 656 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 ACOT2P49753 483 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 SLC7A5Q01650 507 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 AUHQ13825 339 aaKnown RBP7.46□□□□□ -1.22
NUP50-212ENST00000461194 BBS9Q3SYG4 887 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 FAM26FQ5R3K3 315 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 RARS2Q5T160 578 aaKnown RBP7.46□□□□□ -1.22
NUP50-212ENST00000461194 SPATA1Q5VX52 437 aa7.46□□□□□ -1.22
NUP50-212ENST00000461194 JADE1Q6IE81 842 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms