RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 WNT10BO00744 389 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 CLGNO14967 610 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 GRM6O15303 877 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 SPRY3O43610 288 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 DHX16O60231 1041 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 GAS7O60861 476 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 VPS4BO75351 444 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 GLRX3O76003 335 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 PLAUP00749 431 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 IGKV3-15P01624 115 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 FGAP02671 866 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 LPLP06858 475 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 CD48P09326 243 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 KCNA6P17658 529 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 ERCC3P19447 782 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 CHRM3P20309 590 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 PCSK1P29120 753 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 LSP1P33241 339 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 CCR10P46092 362 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 GCLCP48506 637 aaPredicted RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TUBA1BP68363 451 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 IRX1P78414 480 aaPredicted RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 CDK17Q00537 523 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 FANCCQ00597 558 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 SATB1Q01826 763 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 Q0VFX4 171 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 PMS2P11Q13670 270 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 E2F2Q14209 437 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 RFTN1Q14699 578 aaPredicted RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 MUM1L1Q5H9M0 696 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 ZNF774Q6NX45 483 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TAF2Q6P1X5 1199 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 METTL7BQ6UX53 244 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TMEM108Q6UXF1 575 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 NHLRC1Q6VVB1 395 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TMEM64Q6YI46 380 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 FRMD7Q6ZUT3 714 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 UBE2R2Q712K3 238 aaPredicted RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 SLC26A9Q7LBE3 791 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 NOP9Q86U38 636 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 FJX1Q86VR8 437 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 EPHX4Q8IUS5 362 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 FAM109AQ8N4B1 249 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TCP11L2Q8N4U5 519 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 CNBD1Q8NA66 436 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 ADAD2Q8NCV1 583 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 DEPTORQ8TB45 409 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 NEK9Q8TD19 979 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TMED6Q8WW62 240 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 USP13Q92995 863 aaPredicted RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 FATE1Q969F0 183 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 ZNF669Q96BR6 464 aaPredicted RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 IL17FQ96PD4 163 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TUBA1CQ9BQE3 449 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TRIM51Q9BSJ1 452 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 ADI1Q9BV57 179 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 CNPPD1Q9BV87 410 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 MRPL46Q9H2W6 279 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 KCTD10Q9H3F6 313 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 SMOC2Q9H3U7 446 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 PDZD7Q9H5P4 517 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 MVB12BQ9H7P6 319 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 ZMAT4Q9H898 229 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 KRCC1Q9NPI7 259 aaPredicted RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 OXSMQ9NWU1 459 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 B4GALT6Q9UBX8 382 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 IPO11Q9UI26 975 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 KCNK7Q9Y2U2 307 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 MRPS23Q9Y3D9 190 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 PPP2R3BQ9Y5P8 575 aa0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 MYBBP1AQ9BQG0 1328 aaKnown RBP0.31□□□□□ -2.36
SNORD42B-201ENST00000458893 TRBV5-3A0A0A0MS03 114 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 A0A0U1RQF3 1178 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 NDUFAF8A1L188 74 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 KLHL33A6NCF5 533 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 HMX3A6NHT5 357 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 IFNL4K9M1U5 179 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 P2RY10O00398 339 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 SLC22A3O75751 556 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 DNAJC8O75937 253 aaPredicted RBP0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 CHEK2O96017 543 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 PRSS1P07477 247 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 KRTAP1-4P0C5Y4 121 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 DGKAP23743 735 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 PRPH2P23942 346 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 IGFALSP35858 605 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 MANFP55145 182 aaKnown RBP0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 CTXN1P60606 82 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 CCT2P78371 535 aaKnown RBP0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 PPIGQ13427 754 aaKnown RBP eCLIP0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 MTM1Q13496 603 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 HABP2Q14520 560 aaPredicted RBP0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 DDR2Q16832 855 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 UGT8Q16880 541 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 SMTNL2Q2TAL5 461 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 DNTTIP2Q5QJE6 756 aaKnown RBP0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 C6orf10Q5SRN2 563 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 FNBP1LQ5T0N5 605 aa0.3□□□□□ -2.36
SNORD42B-201ENST00000458893 FAAP20Q6NZ36 180 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms