RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 O00370 1275 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 PAEPP09466 180 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 LCP1P13796 627 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 ADIGQ0VDE8 80 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 STX1AQ16623 288 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 EML3Q32P44 896 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 NAIF1Q69YI7 327 aaPredicted RBP19.67■□□□□ 0.74
USP39-209ENST00000458268 DDX42Q86XP3 938 aaKnown RBP eCLIP19.67■□□□□ 0.74
USP39-209ENST00000458268 C1orf210Q8IVY1 113 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 SIX6OS1Q8N1H7 587 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 NDRG1Q92597 394 aaKnown RBP19.67■□□□□ 0.74
USP39-209ENST00000458268 OSBPL6Q9BZF3 934 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 ULBP1Q9BZM6 244 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 ECT2Q9H8V3 914 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 PNPLA8Q9NP80 782 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 ANO10Q9NW15 660 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 OSER1Q9NX31 292 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 RASAL2Q9UJF2 1139 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 ARIH1Q9Y4X5 557 aaPredicted RBP19.67■□□□□ 0.74
USP39-209ENST00000458268 MYOFQ9NZM1 2061 aa19.67■□□□□ 0.74
USP39-209ENST00000458268 FAM92AA1XBS5 289 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 XPO1O14980 1071 aaKnown RBP19.66■□□□□ 0.74
USP39-209ENST00000458268 LETM1O95202 739 aaPredicted RBP19.66■□□□□ 0.74
USP39-209ENST00000458268 NFATC1O95644 943 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 OLFM2O95897 454 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 HMBSP08397 361 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 ZDHHC11BP0C7U3 371 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 ATP5C1P36542 298 aaKnown RBP19.66■□□□□ 0.74
USP39-209ENST00000458268 MFAP3P55082 362 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 NR1H3Q13133 447 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 LRRC32Q14392 662 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 VWA3BQ502W6 1294 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 CAVIN1Q6NZI2 390 aaKnown RBP19.66■□□□□ 0.74
USP39-209ENST00000458268 RSRC2Q7L4I2 434 aaKnown RBP19.66■□□□□ 0.74
USP39-209ENST00000458268 MIB1Q86YT6 1006 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 MSANTD3Q96H12 275 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 NDST4Q9H3R1 872 aa19.66■□□□□ 0.74
USP39-209ENST00000458268 THAP12O43422 761 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 RALAP11233 206 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 GJA4P35212 333 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 AMPD2Q01433 879 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 CSTF1Q05048 431 aaKnown RBP19.65■□□□□ 0.74
USP39-209ENST00000458268 EFEMP1Q12805 493 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 MTAPQ13126 283 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 TSSK4Q6SA08 328 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 Q6ZS52 159 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 CCDC186Q7Z3E2 898 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 SECISBP2LQ93073 1101 aaKnown RBP19.65■□□□□ 0.74
USP39-209ENST00000458268 WBP2Q969T9 261 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 CHFRQ96EP1 664 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 IRF2BPLQ9H1B7 796 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 VPS16Q9H269 839 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 TMEM63CQ9P1W3 806 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 APEX2Q9UBZ4 518 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 KIAA1257Q9ULG3 409 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 CACNA1IQ9P0X4 2223 aa19.65■□□□□ 0.74
USP39-209ENST00000458268 SLC9A3R1O14745 358 aaPredicted RBP19.64■□□□□ 0.73
USP39-209ENST00000458268 ZBED1O96006 694 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 SETSIPP0DME0 302 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 PON1P27169 355 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 TUBP50607 506 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 GOLGA8FQ08AF8 430 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 GOLGA8DPQ0D2H9 430 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 SNX30Q5VWJ9 437 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 C1orf228Q6PIY5 440 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 LCLAT1Q6UWP7 414 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 RBM43Q6ZSC3 357 aaKnown RBP19.64■□□□□ 0.73
USP39-209ENST00000458268 SCD5Q86SK9 330 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 CLDN23Q96B33 292 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 ZSWIM1Q9BR11 485 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 ACP6Q9NPH0 428 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 ST7Q9NRC1 585 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.64■□□□□ 0.73
USP39-209ENST00000458268 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.64■□□□□ 0.73
USP39-209ENST00000458268 R4GN57 208 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 WDFY4Q6ZS81 3184 aa19.64■□□□□ 0.73
USP39-209ENST00000458268 CYP17A1P05093 508 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 TPM2P07951 284 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 PNMA6AP0CW24 399 aaPredicted RBP19.63■□□□□ 0.73
USP39-209ENST00000458268 CHRNB1P11230 501 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 TCF3P15923 654 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 GNA15P30679 374 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 MAGEA9P43362 315 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 YWHAGP61981 247 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP39-209ENST00000458268 GRSF1Q12849 480 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP39-209ENST00000458268 FZD5Q13467 585 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 RAPGEF1Q13905 1077 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 TCP11X2Q5H9J9 407 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 MIIPQ5JXC2 388 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 BTBD8Q5XKL5 378 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 ALYREFQ86V81 257 aaKnown RBP19.63■□□□□ 0.73
USP39-209ENST00000458268 BBS7Q8IWZ6 715 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 ENOX1Q8TC92 643 aaKnown RBP19.63■□□□□ 0.73
USP39-209ENST00000458268 ZFRQ96KR1 1074 aaKnown RBP19.63■□□□□ 0.73
USP39-209ENST00000458268 P2RY13Q9BPV8 354 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 LSM14BQ9BX40 385 aaKnown RBP19.63■□□□□ 0.73
USP39-209ENST00000458268 MIS12Q9H081 205 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 DNMT3LQ9UJW3 386 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 LSM7Q9UK45 103 aaKnown RBP19.63■□□□□ 0.73
USP39-209ENST00000458268 DNAJC12Q9UKB3 198 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms