RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TTC30AQ86WT1 665 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 SCAMP5Q8TAC9 235 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 SPHK2Q9NRA0 654 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 BCCIPQ9P287 314 aaKnown RBP eCLIP22.81■■□□□ 1.245e-7■■■□□ 17.8
CPNE1-220ENST00000458038 DEC1Q9P2X7 70 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 CFAP45Q9UL16 551 aa22.81■■□□□ 1.24
CPNE1-220ENST00000458038 TBC1D3BA6NDS4 549 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 AP1G2O75843 785 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 CLSTN1O94985 981 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 CEACAM1P13688 526 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 CSRP1P21291 193 aaKnown RBP22.8■■□□□ 1.24
CPNE1-220ENST00000458038 AFMP43652 599 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 CASP4P49662 377 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 NOVA1P51513 510 aaKnown RBP22.8■■□□□ 1.24
CPNE1-220ENST00000458038 CUL4BQ13620 913 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 UNC93AQ86WB7 457 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 C12orf40Q86WS4 652 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 ETFBKMTQ8IXQ9 262 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 CRYBG2Q8N1P7 616 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 PHTF2Q8N3S3 785 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 PIGKQ92643 395 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 BACH2Q9BYV9 841 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 NACA2Q9H009 215 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 PCDHA7Q9UN72 937 aa22.8■■□□□ 1.24
CPNE1-220ENST00000458038 FRYQ5TBA9 3013 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 LRRIQ3A6PVS8 624 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-220ENST00000458038 IKBKBO14920 756 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 SLFN14P0C7P3 912 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 ZSCAN22P10073 491 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-220ENST00000458038 HNRNPLP14866 589 aaKnown RBP eCLIP22.79■■□□□ 1.24
CPNE1-220ENST00000458038 CASP1P29466 404 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 HOXD12P35452 270 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 KDSRQ06136 332 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 MESP2Q0VG99 397 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 EMC10Q5UCC4 262 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 SYT12Q8IV01 421 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 FUKQ8N0W3 1084 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 PLEKHO2Q8TD55 490 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 TMC2Q8TDI7 906 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 SNX21Q969T3 373 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 NUSAP1Q9BXS6 441 aaKnown RBP22.79■■□□□ 1.24
CPNE1-220ENST00000458038 CCSER2Q9H7U1 834 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 CSNK1G1Q9HCP0 422 aa22.79■■□□□ 1.24
CPNE1-220ENST00000458038 TLR8Q9NR97 1041 aaKnown RBP22.79■■□□□ 1.24
CPNE1-220ENST00000458038 PDXKO00764 312 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 SCAMP3O14828 347 aaKnown RBP22.78■■□□□ 1.24
CPNE1-220ENST00000458038 ADAM23O75077 832 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 IRX4P78413 519 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 ZACNQ401N2 412 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 HTR3DQ70Z44 454 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 ACOT1Q86TX2 421 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 SFTPA1Q8IWL2 248 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 HMGB4Q8WW32 186 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 KRT82Q9NSB4 513 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 EXOC1Q9NV70 894 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 GMIPQ9P107 970 aa22.78■■□□□ 1.24
CPNE1-220ENST00000458038 CEP192Q8TEP8 1941 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 ANTXRLA6NF34 631 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 CDX4O14627 284 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-220ENST00000458038 ZBTB24O43167 697 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-220ENST00000458038 TLR5O60602 858 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 TULP3O75386 442 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 VNN1O95497 513 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 MYL1P05976 194 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 GOLGA8FQ08AF8 430 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 GOLGA8DPQ0D2H9 430 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 MAP7D1Q3KQU3 841 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 SH3PXD2AQ5TCZ1 1133 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 SLC36A4Q6YBV0 504 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 SCARA5Q6ZMJ2 495 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 BBS7Q8IWZ6 715 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 PGBD3Q8N328 593 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 ZNF513Q8N8E2 541 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-220ENST00000458038 TERB1Q8NA31 727 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 RLN3Q8WXF3 142 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 DNAI2Q9GZS0 605 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 USP25Q9UHP3 1055 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 CIZ1Q9ULV3 898 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-220ENST00000458038 STARD13Q9Y3M8 1113 aa22.77■■□□□ 1.24
CPNE1-220ENST00000458038 TNRC6BQ9UPQ9 1833 aaKnown RBP22.77■■□□□ 1.24
CPNE1-220ENST00000458038 TCRBV21S2A2A0A5A6 115 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 F13A1P00488 732 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 STK4Q13043 487 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 ANO4Q32M45 955 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 TRIM61Q5EBN2 209 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 TMEM25Q86YD3 366 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 XPO6Q96QU8 1125 aaKnown RBP22.76■■□□□ 1.23
CPNE1-220ENST00000458038 SMOQ99835 787 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 SDCBP2Q9H190 292 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 WDR35Q9P2L0 1181 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 RCOR1Q9UKL0 485 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 FRMD4BQ9Y2L6 1034 aa22.76■■□□□ 1.23
CPNE1-220ENST00000458038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.75■■□□□ 1.23
CPNE1-220ENST00000458038 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 PATE3B3GLJ2 98 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 AP5Z1O43299 807 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 KLRC4O43908 158 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 ASS1P00966 412 aaKnown RBP22.75■■□□□ 1.23
CPNE1-220ENST00000458038 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
CPNE1-220ENST00000458038 NTSR1P30989 418 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms