RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-222ENST00000457264 BBS7Q8IWZ6 715 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 ETFBKMTQ8IXQ9 262 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 HDDC3Q8N4P3 179 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 ZFRQ96KR1 1074 aaKnown RBP17.72■□□□□ 0.43
MRPL55-222ENST00000457264 GTPBP2Q9BX10 602 aaKnown RBP17.72■□□□□ 0.43
MRPL55-222ENST00000457264 XYLT2Q9H1B5 865 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 CCSER2Q9H7U1 834 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 DMAP1Q9NPF5 467 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-222ENST00000457264 SPHK2Q9NRA0 654 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 SLC6A14Q9UN76 642 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 ABCA7Q8IZY2 2146 aa17.72■□□□□ 0.43
MRPL55-222ENST00000457264 ATXN2Q99700 1313 aaKnown RBP17.72■□□□□ 0.43
MRPL55-222ENST00000457264 SPTLC2O15270 562 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 EXOC3O60645 756 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 HOXB2P14652 356 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 NTSR1P30989 418 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 RDXP35241 583 aaKnown RBP17.71■□□□□ 0.43
MRPL55-222ENST00000457264 SLC5A3P53794 718 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 CDH8P55286 799 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 BIRC3Q13489 604 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 CNNM4Q6P4Q7 775 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 RABEPKQ7Z6M1 372 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 FAM35AQ86V20 835 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 DEFB119Q8N690 84 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 LINC00301Q8NCQ3 95 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 SCFD1Q8WVM8 642 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 DUSP9Q99956 384 aaKnown RBP17.71■□□□□ 0.43
MRPL55-222ENST00000457264 TMEM121BQ9BXQ6 578 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-222ENST00000457264 COMMD8Q9NX08 183 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 CGNQ9P2M7 1197 aaKnown RBP17.71■□□□□ 0.43
MRPL55-222ENST00000457264 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
MRPL55-222ENST00000457264 UBE4BO95155 1302 aa17.71■□□□□ 0.42
MRPL55-222ENST00000457264 SERPINF2P08697 491 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 IRF1P10914 325 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 GABRG2P18507 467 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 SIM1P81133 766 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-222ENST00000457264 ZNF33AQ06730 810 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 SEMA3BQ13214 749 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 ZNF699Q32M78 642 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 ZNF667Q5HYK9 610 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 PEAR1Q5VY43 1037 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-222ENST00000457264 GRAMD4Q6IC98 578 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 KIAA1211LQ6NV74 962 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 TERB1Q8NA31 727 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 GATA6Q92908 595 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 C7orf25Q9BPX7 421 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 SMYD3Q9H7B4 428 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 IL37Q9NZH6 218 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 GMIPQ9P107 970 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 NEUROG3Q9Y4Z2 214 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 ZZEF1O43149 2961 aa17.7■□□□□ 0.42
MRPL55-222ENST00000457264 SPAARA0A1B0GVQ0 90 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 UPK3BL1B0FP48 263 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 UPK3BL2E5RIL1 263 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 HYAL3O43820 417 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-222ENST00000457264 PPP6R2O75170 966 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 ZNF217O75362 1048 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 AP1G2O75843 785 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 ZDHHC11BP0C7U3 371 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 WASP42768 502 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 AP3M2P53677 418 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 NCOA4Q13772 614 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 PAQR9Q6ZVX9 377 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 UNC13DQ70J99 1090 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 CHPFQ8IZ52 775 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
MRPL55-222ENST00000457264 XPO6Q96QU8 1125 aaKnown RBP17.69■□□□□ 0.42
MRPL55-222ENST00000457264 GZF1Q9H116 711 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-222ENST00000457264 FBXO44Q9H4M3 255 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 VRTNQ9H8Y1 702 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 FSCN3Q9NQT6 498 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 DNAJC17Q9NVM6 304 aaKnown RBP17.69■□□□□ 0.42
MRPL55-222ENST00000457264 CALCOCO1Q9P1Z2 691 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 TFIP11Q9UBB9 837 aaKnown RBP17.69■□□□□ 0.42
MRPL55-222ENST00000457264 STARD13Q9Y3M8 1113 aa17.69■□□□□ 0.42
MRPL55-222ENST00000457264 FAM92AA1XBS5 289 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 TRIM24O15164 1050 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 STX6O43752 255 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 TLR5O60602 858 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 OPHN1O60890 802 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 P4HA1P13674 534 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 CASP4P49662 377 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 GOLGA8FQ08AF8 430 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 GOLGA8DPQ0D2H9 430 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 KNOP1Q1ED39 458 aaKnown RBP17.68■□□□□ 0.42
MRPL55-222ENST00000457264 SCARA5Q6ZMJ2 495 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 HTR3DQ70Z44 454 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 PIP4P1Q86T03 277 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 ACOT1Q86TX2 421 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 C12orf56Q8IXR9 622 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 ZNF396Q96N95 335 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-222ENST00000457264 MAGEF1Q9HAY2 307 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 SLC39A2Q9NP94 309 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 TLR8Q9NR97 1041 aaKnown RBP17.68■□□□□ 0.42
MRPL55-222ENST00000457264 KRT82Q9NSB4 513 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 WDR35Q9P2L0 1181 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 MSRB2Q9Y3D2 182 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 CACNA1GO43497 2377 aa17.68■□□□□ 0.42
MRPL55-222ENST00000457264 ANAPC1Q9H1A4 1944 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms