RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 SLC23A3Q6PIS1 610 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 TMEM25Q86YD3 366 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 BBS7Q8IWZ6 715 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 PGBD3Q8N328 593 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 GATA6Q92908 595 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 DHX58Q96C10 678 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 OTUB2Q96DC9 234 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 CUEDC2Q9H467 287 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 SMYD3Q9H7B4 428 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 SMG1Q96Q15 3661 aaKnown RBP13.15□□□□□ -0.3
TRA2B-206ENST00000456380 ITPR1Q14643 2758 aa13.15□□□□□ -0.3
TRA2B-206ENST00000456380 ATXN2Q99700 1313 aaKnown RBP13.15□□□□□ -0.3
TRA2B-206ENST00000456380 TULP3O75386 442 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 ZDHHC11BP0C7U3 371 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 ATICP31939 592 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 CASP4P49662 377 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 PGFP49763 221 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 SLC5A3P53794 718 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 SNRPFP62306 86 aaKnown RBP13.15□□□□□ -0.31
TRA2B-206ENST00000456380 AMPD3Q01432 767 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 EHHADHQ08426 723 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 BYSLQ13895 437 aaKnown RBP13.15□□□□□ -0.31
TRA2B-206ENST00000456380 STK38Q15208 465 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 PEAR1Q5VY43 1037 aaPredicted RBP13.15□□□□□ -0.31
TRA2B-206ENST00000456380 LYSMD4Q5XG99 296 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 FAM35AQ86V20 835 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 MIB1Q86YT6 1006 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 ZNF513Q8N8E2 541 aaPredicted RBP13.15□□□□□ -0.31
TRA2B-206ENST00000456380 PLEKHO2Q8TD55 490 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.31
TRA2B-206ENST00000456380 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 DUSP9Q99956 384 aaKnown RBP13.15□□□□□ -0.31
TRA2B-206ENST00000456380 C7orf25Q9BPX7 421 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 ZSCAN16Q9H4T2 348 aaPredicted RBP13.15□□□□□ -0.31
TRA2B-206ENST00000456380 FSCN3Q9NQT6 498 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 SPHK2Q9NRA0 654 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 DEC1Q9P2X7 70 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 SH3BP1Q9Y3L3 701 aa13.15□□□□□ -0.31
TRA2B-206ENST00000456380 PI4KAP42356 2102 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 BAHCC1Q9P281 2608 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 FAM92AA1XBS5 289 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 SPTLC2O15270 562 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 GABRG2P18507 467 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 CASP1P29466 404 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 TUBP50607 506 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 BTBD8Q5XKL5 378 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 VRTNQ9H8Y1 702 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 GMIPQ9P107 970 aa13.14□□□□□ -0.31
TRA2B-206ENST00000456380 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
TRA2B-206ENST00000456380 ANKRD11Q6UB99 2663 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-206ENST00000456380 A0A1W2PQF6 199 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 GREM1O60565 184 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 PPP6R2O75170 966 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 WASP42768 502 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 ANO4Q32M45 955 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 KIAA1211LQ6NV74 962 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 TERB1Q8NA31 727 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 IQUBQ8NA54 791 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 ZMIZ2Q8NF64 920 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 INTS4Q96HW7 963 aaKnown RBP13.13□□□□□ -0.31
TRA2B-206ENST00000456380 SDCBP2Q9H190 292 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 SLC32A1Q9H598 525 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-206ENST00000456380 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 CALCOCO1Q9P1Z2 691 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 STARD13Q9Y3M8 1113 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 UBE4BO95155 1302 aa13.13□□□□□ -0.31
TRA2B-206ENST00000456380 TNRC6BQ9UPQ9 1833 aaKnown RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 TMEM8BA6NDV4 472 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 AP5Z1O43299 807 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 STX6O43752 255 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 HYAL3O43820 417 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 PHACTR2O75167 634 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 AP1G2O75843 785 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 BEST1O76090 585 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 TBX18O95935 607 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 CFIP05156 583 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 IRF1P10914 325 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 NTSR1P30989 418 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 HOXD12P35452 270 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 DPP6P42658 865 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 RPL6Q02878 288 aaKnown RBP13.12□□□□□ -0.31
TRA2B-206ENST00000456380 DUOXA1Q1HG43 343 aa13.12□□□□□ -0.31
TRA2B-206ENST00000456380 BMT2Q1RMZ1 405 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms