RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 AFMP43652 599 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 NOVA1P51513 510 aaKnown RBP18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 CLDN10P78369 228 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 GAD2Q05329 585 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 BIRC3Q13489 604 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 ZNF699Q32M78 642 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 PREPLQ4J6C6 727 aaPredicted RBP18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 ZNF667Q5HYK9 610 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 FAM35AQ86V20 835 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 C12orf40Q86WS4 652 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 TTC30AQ86WT1 665 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 GRAMD1CQ8IYS0 662 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 GPT2Q8TD30 523 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 KCNV2Q8TDN2 545 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 ZFRQ96KR1 1074 aaKnown RBP18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 SPACA7Q96KW9 195 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 KCNK16Q96T55 309 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 BLZF1Q9H2G9 400 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 SMYD3Q9H7B4 428 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 DMAP1Q9NPF5 467 aaPredicted RBP18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 TMEM9BQ9NQ34 198 aa18.67■□□□□ 0.58
CCDC144B-204ENST00000455629 FAM92AA1XBS5 289 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 SGK1O00141 431 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 TNFRSF10BO14763 440 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 P2RY2P41231 377 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 DHPSP49366 369 aaPredicted RBP18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 CASP4P49662 377 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 MESP2Q0VG99 397 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 NCOA4Q13772 614 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 BYSLQ13895 437 aaKnown RBP18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 LY6G5CQ5SRR4 150 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 BTBD8Q5XKL5 378 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 LPCAT2Q7L5N7 544 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 SFTPA1Q8IWL2 248 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 SCAMP5Q8TAC9 235 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 PARD3BQ8TEW8 1205 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 MED10Q9BTT4 135 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 CHORDC1Q9UHD1 332 aaPredicted RBP18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 SH3BP1Q9Y3L3 701 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 CHD6Q8TD26 2715 aa18.66■□□□□ 0.58
CCDC144B-204ENST00000455629 PLXND1Q9Y4D7 1925 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 HOXC11O43248 304 aaPredicted RBP18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 MAP3K13O43283 966 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 CLSTN1O94985 981 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 ZDHHC11BP0C7U3 371 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 P4HA1P13674 534 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 CASP1P29466 404 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 DPP6P42658 865 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 SLC5A3P53794 718 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 CDH8P55286 799 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 KDSRQ06136 332 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 CUL4BQ13620 913 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 SPDYCQ5MJ68 293 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 NUDT18Q6ZVK8 323 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 PAQR9Q6ZVX9 377 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 TRMT11Q7Z4G4 463 aaKnown RBP18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 ETFBKMTQ8IXQ9 262 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 PLEKHO2Q8TD55 490 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 TMEM174Q8WUU8 243 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 PIGKQ92643 395 aa18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 BCCIPQ9P287 314 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 EVLQ9UI08 416 aaPredicted RBP18.65■□□□□ 0.58
CCDC144B-204ENST00000455629 MYO18AQ92614 2054 aaKnown RBP18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 PATE3B3GLJ2 98 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 ADAM23O75077 832 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 MBD3O95983 291 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 C4BPAP04003 597 aaKnown RBP18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 PRR29P0C7W0 189 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 CSRP1P21291 193 aaKnown RBP18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 LMAN2Q12907 356 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 SGSM1Q2NKQ1 1148 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 EMC10Q5UCC4 262 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 SLC9A9Q8IVB4 645 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 FUKQ8N0W3 1084 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 CCDC34Q96HJ3 373 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 NACA2Q9H009 215 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 FBXO44Q9H4M3 255 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 CCSER2Q9H7U1 834 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 KRT82Q9NSB4 513 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 DEC1Q9P2X7 70 aa18.64■□□□□ 0.57
CCDC144B-204ENST00000455629 FRYQ5TBA9 3013 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 CFAP47Q6ZTR5 3102 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 TBC1D3BA6NDS4 549 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 LRRIQ3A6PVS8 624 aaPredicted RBP18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 CDX4O14627 284 aaPredicted RBP18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 TULP3O75386 442 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 AP1G2O75843 785 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 RPN1P04843 607 aaKnown RBP18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 MYL1P05976 194 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 CEACAM1P13688 526 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 PTMSP20962 102 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 IRX4P78413 519 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 MAP7D1Q3KQU3 841 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 SH3PXD2AQ5TCZ1 1133 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 ACOT1Q86TX2 421 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 SYT12Q8IV01 421 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 BBS7Q8IWZ6 715 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 ELOA2Q8IYF1 753 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms