RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ZNF132P52740 706 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 MESP2Q0VG99 397 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 E2F5Q15329 346 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 EMC10Q5UCC4 262 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 USP49Q70CQ1 688 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 CBWD2Q8IUF1 395 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 OR6B3Q8NGW1 331 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 NOC3LQ8WTT2 800 aaKnown RBP15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 ADAMTS14Q8WXS8 1223 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 FBXO32Q969P5 355 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 ZFRQ96KR1 1074 aaKnown RBP15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 PCIF1Q9H4Z3 704 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 IL37Q9NZH6 218 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 HSPBP1Q9NZL4 362 aa15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 ANKRD11Q6UB99 2663 aaPredicted RBP15.17■□□□□ 0.02
LYSMD3-202ENST00000453259 WDFY3Q8IZQ1 3526 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 DSPP15924 2871 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 IGHV1OR15-9A0A0B4J2B8 117 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 TAF4O00268 1085 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 NPC1O15118 1278 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 CACNG3O60359 315 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 CAPNS1P04632 268 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 ZDHHC11BP0C7U3 371 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 CD59P13987 128 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 GOLGA8FQ08AF8 430 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 GOLGA8DPQ0D2H9 430 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 WDR72Q3MJ13 1102 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 WDR45BQ5MNZ6 344 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 GRAMD4Q6IC98 578 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 METTL3Q86U44 580 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 FRMD1Q8N878 549 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 SYAP1Q96A49 352 aaPredicted RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 ZNF419Q96HQ0 510 aaPredicted RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 TNIP3Q96KP6 325 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 XPO6Q96QU8 1125 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 GABRG3Q99928 467 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 MRPL45Q9BRJ2 306 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 ZNF518BQ9C0D4 1074 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 TNMDQ9H2S6 317 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 CUEDC2Q9H467 287 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 VRTNQ9H8Y1 702 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 DMAP1Q9NPF5 467 aaPredicted RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 MARK1Q9P0L2 795 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 WDR35Q9P2L0 1181 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 CGNQ9P2M7 1197 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 FASNP49327 2511 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 UBE4BO95155 1302 aa15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 ATXN2Q99700 1313 aaKnown RBP15.16■□□□□ 0.02
LYSMD3-202ENST00000453259 CACNA1EQ15878 2313 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 A0A1W2PQF6 199 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 ANTXRLA6NF34 631 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 A8MXQ7 604 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 GJB3O75712 270 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 TNNI1P19237 187 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 PSMD6Q15008 389 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 TRIP6Q15654 476 aaKnown RBP15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 ANO4Q32M45 955 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 HTR3DQ70Z44 454 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 GLRX5Q86SX6 157 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 CHPFQ8IZ52 775 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 SMARCD1Q96GM5 515 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 HSPA12BQ96MM6 686 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 CGRRF1Q99675 332 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 NACA2Q9H009 215 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 FBXO44Q9H4M3 255 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 CD248Q9HCU0 757 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 APOBEC2Q9Y235 224 aaKnown RBP15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 PCDHB9Q9Y5E1 797 aa15.15■□□□□ 0.02
LYSMD3-202ENST00000453259 NDUFS2O75306 463 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 ZNF883P0CG24 379 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 HOXB3P14651 431 aaPredicted RBP15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 AP3M2P53677 418 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 CACNA2D1P54289 1103 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 AMPD3Q01432 767 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 TRPC3Q13507 836 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 CNNM4Q6P4Q7 775 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 BBS7Q8IWZ6 715 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 CHCHD4Q8N4Q1 142 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 TRIML1Q8N9V2 468 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 IPO4Q8TEX9 1081 aaKnown RBP15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 SCFD1Q8WVM8 642 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 FAM84AQ96KN4 292 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 B3GNT5Q9BYG0 378 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 TMEM30AQ9NV96 361 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 GPSM3Q9Y4H4 160 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 CLIC4Q9Y696 253 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 FREM2Q5SZK8 3169 aa15.14■□□□□ 0.01
LYSMD3-202ENST00000453259 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
LYSMD3-202ENST00000453259 NDUFV2P19404 249 aa15.13■□□□□ 0.01
LYSMD3-202ENST00000453259 TRIM21P19474 475 aaKnown RBP15.13■□□□□ 0.01
LYSMD3-202ENST00000453259 SLC5A3P53794 718 aa15.13■□□□□ 0.01
LYSMD3-202ENST00000453259 CYP24A1Q07973 514 aa15.13■□□□□ 0.01
LYSMD3-202ENST00000453259 PLEKHG6Q3KR16 790 aa15.13■□□□□ 0.01
LYSMD3-202ENST00000453259 C8orf34Q49A92 452 aa15.13■□□□□ 0.01
LYSMD3-202ENST00000453259 KLHDC10Q6PID8 442 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms