RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 FLT4P35916 1363 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 KIF24Q5T7B8 1368 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 PCDH11XQ9BZA7 1347 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 PCDH11YQ9BZA8 1340 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 DIRC3C9JPN6 131 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 FYB1O15117 783 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 EPB41L2O43491 1005 aaKnown RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 GPR32O75388 356 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 NCR1O76036 304 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 RHOBTB3O94955 611 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 FAM163BP0C2L3 166 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 VEGFAP15692 232 aaPredicted RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 ATP5JP18859 108 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 ITGA8P53708 1063 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 ATP8B2P98198 1209 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 MTM1Q13496 603 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 GPR162Q16538 588 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 ZACNQ401N2 412 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 PDCD4Q53EL6 469 aaKnown RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 FAM102AQ5T9C2 384 aaPredicted RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 CYP26C1Q6V0L0 522 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 FAM90A1Q86YD7 464 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 ANKRD18AQ8IVF6 992 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 SYNE4Q8N205 404 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 AMER2Q8N7J2 671 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 DCBLD1Q8N8Z6 715 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 PCSK9Q8NBP7 692 aaKnown RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 TRAPPC12Q8WVT3 735 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 CASKIN2Q8WXE0 1202 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 SKA1Q96BD8 255 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 NMD3Q96D46 503 aaKnown RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 CYFIP2Q96F07 1278 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 ZC3H10Q96K80 434 aaKnown RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 MSLNLQ96KJ4 702 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 SNX22Q96L94 193 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 UBXN10Q96LJ8 280 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 TBATAQ96M53 351 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 RMDN3Q96TC7 470 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 NEU1Q99519 415 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 MYOCQ99972 504 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 HEPHQ9BQS7 1158 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 SYT17Q9BSW7 474 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 PAGR1Q9BTK6 254 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 MLST8Q9BVC4 326 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 TMEM120AQ9BXJ8 343 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 STK33Q9BYT3 514 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 AKIP1Q9NQ31 210 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 PGAP2Q9UHJ9 254 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 CCNL1Q9UK58 526 aaPredicted RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 MAN2B2Q9Y2E5 1009 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 LRRFIP2Q9Y608 721 aaKnown RBP5.03□□□□□ -1.6
LINC00393-202ENST00000452852 NSD3Q9BZ95 1437 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 TOGARAM1Q9Y4F4 1720 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 INSRP06213 1382 aa5.03□□□□□ -1.6
LINC00393-202ENST00000452852 GOLGA6L3A6NEY3 463 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 RRN3P2A6NIE6 340 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 AQP12BA6NM10 295 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 BTN3A1O00481 513 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 RNASET2O00584 256 aaKnown RBP5.02□□□□□ -1.61
LINC00393-202ENST00000452852 NPC1O15118 1278 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 TBC1D4O60343 1298 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 ITGB1P05556 798 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 CD1AP06126 327 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 SBK3P0C264 359 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 MYL4P12829 197 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 LAG3P18627 525 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 MAN1A1P33908 653 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 KCNJ5P48544 419 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 ARFIP2P53365 341 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 DDX10Q13206 875 aaKnown RBP5.02□□□□□ -1.61
LINC00393-202ENST00000452852 PRKG1Q13976 671 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 TIGD2Q4W5G0 525 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 OTUD7BQ6GQQ9 843 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 JMJD6Q6NYC1 403 aaPredicted RBP5.02□□□□□ -1.61
LINC00393-202ENST00000452852 MZT2AQ6P582 158 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 LRRC55Q6ZSA7 311 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 MED25Q71SY5 747 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 MAATS1Q7Z4T9 603 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 OR6B3Q8NGW1 331 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 KBTBD7Q8WVZ9 684 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 IQCDQ96DY2 449 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 SMURF2Q9HAU4 748 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 VPS45Q9NRW7 570 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 TBC1D23Q9NUY8 699 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 DACT1Q9NYF0 836 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 SLC23A1Q9UHI7 598 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
LINC00393-202ENST00000452852 LAS1LQ9Y4W2 734 aaKnown RBP5.02□□□□□ -1.61
LINC00393-202ENST00000452852 C4BP0C0L5 1744 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 UBR3Q6ZT12 1888 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 NSD2O96028 1365 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 MAP3K5Q99683 1374 aa5.02□□□□□ -1.61
LINC00393-202ENST00000452852 TMEM233B4DJY2 109 aa5.01□□□□□ -1.61
LINC00393-202ENST00000452852 J3KRW8 73 aa5.01□□□□□ -1.61
LINC00393-202ENST00000452852 EYA2O00167 538 aa5.01□□□□□ -1.61
LINC00393-202ENST00000452852 EIF3FO00303 357 aaPredicted RBP5.01□□□□□ -1.61
LINC00393-202ENST00000452852 TRIM38O00635 465 aa5.01□□□□□ -1.61
LINC00393-202ENST00000452852 NCAM2O15394 837 aa5.01□□□□□ -1.61
LINC00393-202ENST00000452852 LPXNO60711 386 aa5.01□□□□□ -1.61
LINC00393-202ENST00000452852 NDUFA10O95299 355 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms