RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 LMAN2Q12907 356 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 BIRC3Q13489 604 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 BYSLQ13895 437 aaKnown RBP11.55□□□□□ -0.56
USP1-204ENST00000452143 ZNF667Q5HYK9 610 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 LY6G5CQ5SRR4 150 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 HECTD3Q5T447 861 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 LPCAT2Q7L5N7 544 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 C12orf40Q86WS4 652 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 ETFBKMTQ8IXQ9 262 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 PHTF2Q8N3S3 785 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 CCDC33Q8N5R6 958 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 TXNDC5Q8NBS9 432 aaKnown RBP11.55□□□□□ -0.56
USP1-204ENST00000452143 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 SMYD3Q9H7B4 428 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 IL37Q9NZH6 218 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 SH3BP1Q9Y3L3 701 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 PKD1L2Q7Z442 2459 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 GON4LQ3T8J9 2241 aa11.55□□□□□ -0.56
USP1-204ENST00000452143 CLDN5O00501 218 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 SCAMP3O14828 347 aaKnown RBP11.54□□□□□ -0.56
USP1-204ENST00000452143 POLR2DO15514 142 aaKnown RBP11.54□□□□□ -0.56
USP1-204ENST00000452143 CLSTN1O94985 981 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 ZDHHC11BP0C7U3 371 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 CEACAM1P13688 526 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 HNRNPLP14866 589 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP1-204ENST00000452143 TRIM21P19474 475 aaKnown RBP11.54□□□□□ -0.56
USP1-204ENST00000452143 SLC6A11P48066 632 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 DHPSP49366 369 aaPredicted RBP11.54□□□□□ -0.56
USP1-204ENST00000452143 EMP3P54852 163 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 KDSRQ06136 332 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 ZNF252P-AS1Q0IIN9 211 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 MESP2Q0VG99 397 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 NCOA4Q13772 614 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 BTBD8Q5XKL5 378 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 TTC30AQ86WT1 665 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 SLC9A9Q8IVB4 645 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 SFTPA1Q8IWL2 248 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 KCNK16Q96T55 309 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 MED10Q9BTT4 135 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 SLC39A2Q9NP94 309 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 KRT82Q9NSB4 513 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 FAM13BQ9NYF5 915 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 BCCIPQ9P287 314 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP1-204ENST00000452143 INVSQ9Y283 1065 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 ANKRD11Q6UB99 2663 aaPredicted RBP11.54□□□□□ -0.56
USP1-204ENST00000452143 CACNA1EQ15878 2313 aa11.54□□□□□ -0.56
USP1-204ENST00000452143 TCRBV21S2A2A0A5A6 115 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 ANTXRLA6NF34 631 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 LRRIQ3A6PVS8 624 aaPredicted RBP11.53□□□□□ -0.56
USP1-204ENST00000452143 CDX4O14627 284 aaPredicted RBP11.53□□□□□ -0.56
USP1-204ENST00000452143 ADAM23O75077 832 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 AP1G2O75843 785 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 SH3PXD2AQ5TCZ1 1133 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 PEAR1Q5VY43 1037 aaPredicted RBP11.53□□□□□ -0.56
USP1-204ENST00000452143 RESP18Q5W5W9 173 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 ATL3Q6DD88 541 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 SCARA5Q6ZMJ2 495 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 UNC93AQ86WB7 457 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 SYT12Q8IV01 421 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 FUKQ8N0W3 1084 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 ZNF513Q8N8E2 541 aaPredicted RBP11.53□□□□□ -0.56
USP1-204ENST00000452143 TERB1Q8NA31 727 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 SCAMP5Q8TAC9 235 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 TAF4BQ92750 862 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 NUSAP1Q9BXS6 441 aaKnown RBP11.53□□□□□ -0.56
USP1-204ENST00000452143 NACA2Q9H009 215 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 BLZF1Q9H2G9 400 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 FBXO44Q9H4M3 255 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 CCSER2Q9H7U1 834 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 CSNK1G1Q9HCP0 422 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 SPHK2Q9NRA0 654 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 DEC1Q9P2X7 70 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 SPEGQ15772 3267 aa11.53□□□□□ -0.56
USP1-204ENST00000452143 PCDH15Q96QU1 1955 aa11.52□□□□□ -0.56
USP1-204ENST00000452143 TBC1D3BA6NDS4 549 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 PATE3B3GLJ2 98 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 AP5Z1O43299 807 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 TLR5O60602 858 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 TULP3O75386 442 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.57
USP1-204ENST00000452143 RPN1P04843 607 aaKnown RBP11.52□□□□□ -0.57
USP1-204ENST00000452143 PROS1P07225 676 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 CASP1P29466 404 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 PTGER3P43115 390 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 ME1P48163 572 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 CASP4P49662 377 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 CDH8P55286 799 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 IRX4P78413 519 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 GOLGA8FQ08AF8 430 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 GOLGA8DPQ0D2H9 430 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 CUL4BQ13620 913 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 SGSM1Q2NKQ1 1148 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 MAP7D1Q3KQU3 841 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 ZACNQ401N2 412 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 TRIM61Q5EBN2 209 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 C10orf76Q5T2E6 689 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms