RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 CEP83Q9Y592 693 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 XIRP2A4UGR9 3374 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 SCN1AP35498 2009 aa9.34□□□□□ -0.91
COL8A1-203ENST00000452013 TRIP11Q15643 1979 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 ATG2AQ2TAZ0 1938 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 A0A1W2PQC6 194 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 A0A1W2PQH9 124 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 LEFTY2O00292 366 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 TULP2O00295 520 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 MAN2B1O00754 1011 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 SLC9A3R1O14745 358 aaPredicted RBP9.33□□□□□ -0.92
COL8A1-203ENST00000452013 SART1O43290 800 aaKnown RBP9.33□□□□□ -0.92
COL8A1-203ENST00000452013 COCHO43405 550 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 TLR5O60602 858 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 FBXO21O94952 628 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 PRAMEF12O95522 483 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 OLFM2O95897 454 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 CALCAP01258 141 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 LCP1P13796 627 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 IFNAR2P48551 515 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 RGS7P49802 495 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 KPNA1P52294 538 aaPredicted RBP9.33□□□□□ -0.92
COL8A1-203ENST00000452013 UBASH3AP57075 661 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 YWHAGP61981 247 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL8A1-203ENST00000452013 FANCCQ00597 558 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 GOLGA8FQ08AF8 430 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 GOLGA8DPQ0D2H9 430 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 MTF1Q14872 753 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 NR1I3Q14994 352 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 BTBD8Q5XKL5 378 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 DENND1BQ6P3S1 775 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 KLHDC10Q6PID8 442 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 C1orf228Q6PIY5 440 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 ZNF677Q86XU0 584 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 SUGP1Q8IWZ8 645 aaKnown RBP9.33□□□□□ -0.92
COL8A1-203ENST00000452013 FBXL6Q8N531 539 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 TTC16Q8NEE8 873 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 SH3RF2Q8TEC5 729 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 RNF139Q8WU17 664 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 IRGQQ8WZA9 623 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 EXOC4Q96A65 974 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 MSANTD3Q96H12 275 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 LRRC3BQ96PB8 259 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 LRFN3Q9BTN0 628 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 ULBP1Q9BZM6 244 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 GANQ9H2C0 597 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 NLRC4Q9NPP4 1024 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 CYLDQ9NQC7 956 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 ARHGEF3Q9NR81 526 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 ST7Q9NRC1 585 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 ABCC13Q9NSE7 274 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL8A1-203ENST00000452013 TBC1D14Q9P2M4 693 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 DNMT3LQ9UJW3 386 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 CA14Q9ULX7 337 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 CCL26Q9Y258 94 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 MRPS17Q9Y2R5 130 aaKnown RBP9.33□□□□□ -0.92
COL8A1-203ENST00000452013 CPQQ9Y646 472 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 PLXNA3P51805 1871 aa9.33□□□□□ -0.92
COL8A1-203ENST00000452013 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 E2F8A0AVK6 867 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 FAM86C2PA6NEL3 165 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 NCAM2O15394 837 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 TEX33O43247 280 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 CYP11B1P15538 503 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 SOX5P35711 763 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 RPL34P49207 117 aaKnown RBP9.32□□□□□ -0.92
COL8A1-203ENST00000452013 KLK7P49862 253 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 CLCN5P51795 746 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 STARD6P59095 220 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 COG7P83436 770 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 ADIGQ0VDE8 80 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 RUNX3Q13761 415 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 MLF2Q15773 248 aaPredicted RBP9.32□□□□□ -0.92
COL8A1-203ENST00000452013 ZNF77Q15935 545 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 ITPRIPL2Q3MIP1 535 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 C10orf120Q5SQS8 335 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 BSPRYQ5W0U4 402 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 ZNF852Q6ZMS4 543 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 RSRC2Q7L4I2 434 aaKnown RBP9.32□□□□□ -0.92
COL8A1-203ENST00000452013 SCD5Q86SK9 330 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 TMEM110Q86TL2 294 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 SLC47A2Q86VL8 602 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 TMEM35BQ8NCS4 154 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 FLCNQ8NFG4 579 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 OSCP1Q8WVF1 389 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 NAP1L5Q96NT1 182 aaPredicted RBP9.32□□□□□ -0.92
COL8A1-203ENST00000452013 FAM83CQ9BQN1 747 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 TRIM62Q9BVG3 475 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 NUP58Q9BVL2 599 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 EDEM3Q9BZQ6 932 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 MIS12Q9H081 205 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 CCSER2Q9H7U1 834 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 NMUR1Q9HB89 426 aa9.32□□□□□ -0.92
COL8A1-203ENST00000452013 ACP6Q9NPH0 428 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms