RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 LRRC43Q8N309 656 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 SDR16C5Q8N3Y7 309 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 TMEM199Q8N511 208 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 C1orf54Q8WWF1 131 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 BADQ92934 168 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 KCNK16Q96T55 309 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 ACBD6Q9BR61 282 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 ERP44Q9BS26 406 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 C11orf84Q9BUA3 381 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-202ENST00000450991 UBXN6Q9BZV1 441 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 RAB6CQ9H0N0 254 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 RAB17Q9H0T7 212 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 NEUROG2Q9H2A3 272 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 ZWILCHQ9H900 591 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 VIPAS39Q9H9C1 493 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 DSEQ9UL01 958 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 UTP11Q9Y3A2 253 aaKnown RBP8.64□□□□□ -1.03
NECAP1-202ENST00000450991 DAPK3O43293 454 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 AP1G2O75843 785 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 FAM153BP0C7A2 387 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 FAM200BP0CF97 657 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 KRT10P13645 584 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 TYMPP19971 482 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 BDNFP23560 247 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 KDELR1P24390 212 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 CETN2P41208 172 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 PTPN9P43378 593 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 TNNT3P45378 269 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-202ENST00000450991 KCNJ1P48048 391 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 NDUFV1P49821 464 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 DRG2P55039 364 aaKnown RBP8.64□□□□□ -1.03
NECAP1-202ENST00000450991 ADIGQ0VDE8 80 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 SMTNL2Q2TAL5 461 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 FAM153CQ494X1 144 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 TFDP3Q5H9I0 405 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 SPOUT1Q5T280 376 aaKnown RBP8.64□□□□□ -1.03
NECAP1-202ENST00000450991 C16orf59Q7L2K0 433 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 GPRIN1Q7Z2K8 1008 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 THEM5Q8N1Q8 247 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 ZMIZ2Q8NF64 920 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 CMASQ8NFW8 434 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-202ENST00000450991 ATG4AQ8WYN0 398 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 CFAP57Q96MR6 1250 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 GDAP1L1Q96MZ0 367 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 SMOQ99835 787 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 MRPL9Q9BYD2 267 aaKnown RBP8.64□□□□□ -1.03
NECAP1-202ENST00000450991 FAM114A2Q9NRY5 505 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 FAM153AQ9UHL3 310 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 RASAL2Q9UJF2 1139 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 HPCAL4Q9UM19 191 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 USP18Q9UMW8 372 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 EFR3BQ9Y2G0 817 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 LAMA3Q16787 3333 aa8.64□□□□□ -1.03
NECAP1-202ENST00000450991 RANBP2P49792 3224 aaKnown RBP8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ABHD14A-ACY1A0A1B0GW23 586 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 LRRD1A4D1F6 860 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 SPDYE4A6NLX3 237 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ENDOD1O94919 500 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 AMHP03971 560 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 SDC4P31431 198 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ARSEP51690 589 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ARPP19P56211 112 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 SLC8A3P57103 927 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 TSPY1Q01534 308 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 CCNG2Q16589 344 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 KCNT1Q5JUK3 1230 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 VARS2Q5ST30 1063 aaKnown RBP8.63□□□□□ -1.03
NECAP1-202ENST00000450991 FUT10Q6P4F1 479 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 SND1Q7KZF4 910 aaKnown RBP eCLIP8.63□□□□□ -1.03
NECAP1-202ENST00000450991 CCDC105Q8IYK2 499 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 STKLD1Q8NE28 680 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 CENPIQ92674 756 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-202ENST00000450991 TOP1MTQ969P6 601 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 PGLYRP2Q96PD5 576 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 COLEC11Q9BWP8 271 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ADAM33Q9BZ11 813 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 DPH5Q9H2P9 285 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 HOMER3Q9NSC5 361 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 PRKAG2Q9UGJ0 569 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 PCSK1NQ9UHG2 260 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ARHGEF37A1IGU5 675 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 HHLA1C9JL84 531 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 TRAPPC3O43617 180 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 TJP3O95049 919 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ALDH7A1P49419 539 aaKnown RBP8.63□□□□□ -1.03
NECAP1-202ENST00000450991 SNX1Q13596 522 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 CDO1Q16878 200 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 SLC39A12Q504Y0 691 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 RAB41Q5JT25 222 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 EFHC1Q5JVL4 640 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 RTP2Q5QGT7 225 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ZFYVE27Q5T4F4 411 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 ZNF365Q70YC5 407 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 MREGQ8N565 214 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 FAM172AQ8WUF8 416 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 TEKT4Q8WW24 435 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 SMARCD1Q96GM5 515 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 DDX23Q9BUQ8 820 aaKnown RBP8.63□□□□□ -1.03
NECAP1-202ENST00000450991 CWH43Q9H720 699 aa8.63□□□□□ -1.03
NECAP1-202ENST00000450991 CSNK1G1Q9HCP0 422 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms