RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 GABBR2O75899 941 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 RTN3O95197 1032 aaPredicted RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 LTFP02788 710 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 RDXP35241 583 aaKnown RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 CACNA2D1P54289 1103 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 DSG1Q02413 1049 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 DEUP1Q05D60 604 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 DDR2Q16832 855 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 SMTNL2Q2TAL5 461 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 SLC25A52Q3SY17 297 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 DCAF12L1Q5VU92 463 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 DAB2IPQ5VWQ8 1189 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 KAZNQ674X7 775 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 C16orf59Q7L2K0 433 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 RSRC2Q7L4I2 434 aaKnown RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 STRADAQ7RTN6 431 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 VPS52Q8N1B4 723 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 RNF139Q8WU17 664 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 NDRG1Q92597 394 aaKnown RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 RNF34Q969K3 372 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 MAGOHBQ96A72 148 aaKnown RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 PIWIL1Q96J94 861 aaKnown RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 TBCBQ99426 244 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 HEMGNQ9BXL5 484 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 OSBPL8Q9BZF1 889 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
RFC4-210ENST00000449502 KLHL11Q9NVR0 708 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 TMEM51Q9NW97 253 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 COMMD8Q9NX08 183 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 COX16Q9P0S2 106 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 RASAL2Q9UJF2 1139 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 RWDD3Q9Y3V2 267 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 ANK1P16157 1881 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 CITO14578 2027 aa10.12□□□□□ -0.79
RFC4-210ENST00000449502 CCDC85CA6NKD9 419 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 HHLA1C9JL84 531 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 PI4K2BG5E9Z4 385 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 M0QYT0 321 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 ERLIN1O75477 346 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 FGF18O76093 207 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 F9P00740 461 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 RARAP10276 462 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 HAPLN1P10915 354 aaPredicted RBP10.11□□□□□ -0.79
RFC4-210ENST00000449502 RALAP11233 206 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 DNAJB2P25686 324 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 YWHAQP27348 245 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 OR1D2P34982 312 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 CTNNB1P35222 781 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 ALDH1A3P47895 512 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 CDH6P55285 790 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 YWHAGP61981 247 aaKnown RBP eCLIP10.11□□□□□ -0.79
RFC4-210ENST00000449502 HTRA4P83105 476 aaPredicted RBP10.11□□□□□ -0.79
RFC4-210ENST00000449502 SLC25A11Q02978 314 aaKnown RBP10.11□□□□□ -0.79
RFC4-210ENST00000449502 DUSP4Q13115 394 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 NME3Q13232 169 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 VEPH1Q14D04 833 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 PDK2Q15119 407 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 LLGL1Q15334 1064 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 ARL13BQ3SXY8 428 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 TFDP3Q5H9I0 405 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 KCNT1Q5JUK3 1230 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 BSPRYQ5W0U4 402 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 TPGS2Q68CL5 300 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 PM20D1Q6GTS8 502 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 SLC8B1Q6J4K2 584 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 AADACL2Q6P093 401 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 SPOCD1Q6ZMY3 1216 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 RNF19BQ6ZMZ0 732 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 DENND5BQ6ZUT9 1274 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 GPRIN1Q7Z2K8 1008 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 RFX6Q8HWS3 928 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 SCML4Q8N228 414 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 NOA1Q8NC60 698 aaKnown RBP10.11□□□□□ -0.79
RFC4-210ENST00000449502 TEKT4Q8WW24 435 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 FBXO32Q969P5 355 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 SLITRK1Q96PX8 696 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 SLC2A13Q96QE2 648 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 CALN1Q9BXU9 219 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 SLITRK6Q9H5Y7 841 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 RC3H2Q9HBD1 1191 aaKnown RBP10.11□□□□□ -0.79
RFC4-210ENST00000449502 CHST7Q9NS84 486 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 ABCC13Q9NSE7 274 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.11□□□□□ -0.79
RFC4-210ENST00000449502 AFF4Q9UHB7 1163 aaKnown RBP10.11□□□□□ -0.79
RFC4-210ENST00000449502 FEZ2Q9UHY8 353 aaPredicted RBP10.11□□□□□ -0.79
RFC4-210ENST00000449502 NAALADL1Q9UQQ1 740 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 SLC27A5Q9Y2P5 690 aa10.11□□□□□ -0.79
RFC4-210ENST00000449502 TARSL2A2RTX5 802 aaKnown RBP10.1□□□□□ -0.79
RFC4-210ENST00000449502 YJEFN3A6XGL0 299 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 E7ENQ6 273 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 PRRG1O14668 218 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 FSCN2O14926 492 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 TBC1D4O60343 1298 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 PHF2O75151 1096 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 RPL17P18621 184 aaKnown RBP10.1□□□□□ -0.79
RFC4-210ENST00000449502 CHRNA3P32297 505 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 GPR15P49685 360 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 EPHB4P54760 987 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 ROR1Q01973 937 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms