RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CATSPERGQ6ZRH7 1159 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 TSHZ1Q6ZSZ6 1077 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 PPM1NQ8N819 430 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 PDCD7Q8N8D1 485 aaKnown RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 PPFIBP2Q8ND30 876 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 RAB6BQ9NRW1 208 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 ARMCX1Q9P291 453 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 C19orf81C9J6K1 198 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 GAS2O43903 313 aaKnown RBP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 RFPL1O75677 317 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 EGFRP00533 1210 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 HIRAP54198 1017 aaPredicted RBP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 MRPS5P82675 430 aaKnown RBP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 PTPN11Q06124 597 aaPredicted RBP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 BST1Q10588 318 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 FSTL1Q12841 308 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 TEX44Q53QW1 395 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 ILDR2Q71H61 639 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 E2F7Q96AV8 911 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 LRRC39Q96DD0 335 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 CFAP36Q96G28 342 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 ADPGKQ9BRR6 497 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 CNPY3Q9BT09 278 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 SDCBP2Q9H190 292 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 C2orf40Q9H1Z8 148 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 ZC3H7BQ9UGR2 993 aaKnown RBP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 SPDYE5A6NIY4 337 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 B2RBV5 119 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 H7C0C1 242 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 MICAL2O94851 1124 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 GPD2P43304 727 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 ATP5OP48047 213 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 THOC5Q13769 683 aaKnown RBP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 TBCCQ15814 346 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 DCAF15Q66K64 600 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 CTAGE3PQ8IX95 158 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 SMC1BQ8NDV3 1235 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 MTBPQ96DY7 904 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 RNF157Q96PX1 679 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 WWP1Q9H0M0 922 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 PLAC1Q9HBJ0 212 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 SIX4Q9UIU6 781 aa19.84■□□□□ 0.77
SDCBP-204ENST00000447182 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.84■□□□□ 0.77
SDCBP-204ENST00000447182 MGAMO43451 1857 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 CXorf49A8MYA2 514 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-204ENST00000447182 SRGAP2CP0DJJ0 459 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 TMPRSS15P98073 1019 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 RCN2Q14257 317 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 FAM102AQ5T9C2 384 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-204ENST00000447182 NBPF12Q5TAG4 269 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-204ENST00000447182 OR52E8Q6IFG1 317 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 NET1Q7Z628 596 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-204ENST00000447182 CAND1Q86VP6 1230 aaKnown RBP19.83■□□□□ 0.77
SDCBP-204ENST00000447182 TREML1Q86YW5 311 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 RNF149Q8NC42 400 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 FAM167AQ96KS9 214 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 PICK1Q9NRD5 415 aa19.83■□□□□ 0.77
SDCBP-204ENST00000447182 CILPO75339 1184 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 HMGCRP04035 888 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 GPD1P21695 349 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 OSBPP22059 807 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 CDH8P55286 799 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 PLD5Q8N7P1 536 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 DTX3LQ8TDB6 740 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 UCMAQ8WVF2 138 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 TWNKQ96RR1 684 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 MECRQ9BV79 373 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 DLGAP2Q9P1A6 1054 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 SCOCQ9UIL1 159 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 PLA2G4CQ9UP65 541 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 BCLAF3A2AJT9 711 aaKnown RBP19.82■□□□□ 0.76
SDCBP-204ENST00000447182 C2CD4BA6NLJ0 364 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 MAP3K7O43318 606 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 SNNO75324 88 aaPredicted RBP19.82■□□□□ 0.76
SDCBP-204ENST00000447182 KRT38O76015 456 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 UPP2O95045 317 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 IL18RAPO95256 599 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 APOEP02649 317 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 TGM2P21980 687 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 HSPA1LP34931 641 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 PDK2Q15119 407 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 TRMT5Q32P41 509 aaKnown RBP19.82■□□□□ 0.76
SDCBP-204ENST00000447182 C11orf91Q3C1V1 193 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 SYCP2LQ5T4T6 812 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 MAP7D3Q8IWC1 876 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 RBM15BQ8NDT2 890 aaKnown RBP19.82■□□□□ 0.76
SDCBP-204ENST00000447182 MCUQ8NE86 351 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 CHST13Q8NET6 341 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.82■□□□□ 0.76
SDCBP-204ENST00000447182 IFT43Q96FT9 208 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 TMEM176AQ96HP8 235 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 ZNF184Q99676 751 aaPredicted RBP19.82■□□□□ 0.76
SDCBP-204ENST00000447182 ELOVL4Q9GZR5 314 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 KLC2Q9H0B6 622 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 KRT82Q9NSB4 513 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 HOXC10Q9NYD6 342 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 TAGLN3Q9UI15 199 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 ANGPTL2Q9UKU9 493 aa19.82■□□□□ 0.76
SDCBP-204ENST00000447182 IGKV6-21A0A0C4DH24 114 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms