RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PRMT9Q6P2P2 845 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SPOCD1Q6ZMY3 1216 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 RBM15BQ8NDT2 890 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 PRELID1Q9Y255 219 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 BICRAQ9NZM4 1560 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 NSMCE4AQ9NXX6 385 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 CNTNAP5Q8WYK1 1306 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TRDMT1O14717 391 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 SOX11P35716 441 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ELK3P41970 407 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 AQP4P55087 323 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 MAP3K10Q02779 954 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 DIABLOQ9NR28 239 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 MAD2L2Q9UI95 211 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 INO80Q9ULG1 1556 aaPredicted RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 TMEM121Q9BTD3 319 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ABCA1O95477 2261 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SLCO1B7G3V0H7 640 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ACAT1P24752 427 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 BROXQ5VW32 411 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 USP13Q92995 863 aaPredicted RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 PGBD4Q96DM1 585 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 GPATCH1Q9BRR8 931 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 SEC24AO95486 1093 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 HLA-DPA1P20036 260 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SCNN1DP51172 638 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 JAK3P52333 1124 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TRIM69Q86WT6 500 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SYTL1Q8IYJ3 562 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TUFT1Q9NNX1 390 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 HACD3Q9P035 362 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ALPK2Q86TB3 2170 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 M0QYV0 167 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TSHRP16473 764 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SDC4P31431 198 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 RBBP7Q16576 425 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 CXorf21Q9HAI6 301 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TMEM8AQ9HCN3 771 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 KCNA2P16389 499 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 HSPA2P54652 639 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 GPR107Q5VW38 600 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ARCQ7LC44 396 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 KATNAL2Q8IYT4 538 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SLC17A7Q9P2U7 560 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 DRG1Q9Y295 367 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 CENPXA8MT69 81 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 PRPF4O43172 522 aaKnown RBP eCLIP8.13□□□□□ -1.113e-7■■■□□ 15.3
SMG1-202ENST00000446231 ALAS1P13196 640 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SPDYAQ5MJ70 313 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 DHRSXQ8N5I4 330 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 OSCP1Q8WVF1 389 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TSPAN17Q96FV3 270 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 HIPK3Q9H422 1215 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TMEM59LQ9UK28 342 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 USP6P35125 1406 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 DCXO43602 365 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 KANSL1LA0AUZ9 987 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TMEM53Q6P2H8 277 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ATG14Q6ZNE5 492 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 KCTD14Q9BQ13 255 aaPredicted RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 WDR41Q9HAD4 459 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SSU72Q9NP77 194 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 VTI1BQ9UEU0 232 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 TGDSO95455 350 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 PSAPP07602 524 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ADSSP30520 456 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 VPS33BQ9H267 617 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ZNF23P17027 643 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 ABL2P42684 1182 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 HAUS6Q7Z4H7 955 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 RPF1Q9H9Y2 349 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 MYO1GB0I1T2 1018 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 NR5A2O00482 541 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ALOX15BO15296 676 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 UBE3AQ05086 875 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 VPS33AQ96AX1 596 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 LMCD1Q9NZU5 365 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 FASP25445 335 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 UBXN2AP68543 259 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 KRT27Q7Z3Y8 459 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 FNIP1Q8TF40 1166 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 SAGE2PA6NJ88 616 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 CYP27B1O15528 508 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PAMP19021 973 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 GNAZP19086 355 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 HMGB2P26583 209 aaKnown RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 ZYXQ15942 572 aaKnown RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 ZBED5Q49AG3 693 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 QKIQ96PU8 341 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMG1-202ENST00000446231 PHF24Q9UPV7 400 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 TUBA1BP68363 451 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 MRPS22P82650 360 aaKnown RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 UGP2Q16851 508 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 TUBA1AQ71U36 451 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ACTL9Q8TC94 416 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PIGBQ92521 554 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 CEP44Q9C0F1 390 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 IARS2Q9NSE4 1012 aaKnown RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 C2orf71A6NGG8 1288 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms